Plant Biology - 13 (4-6), 2011

Plant Biology - 13 (4), 2011



Contents:

REVIEW ARTICLE

Plant cation/H+ exchangers (CAXs): biological functions and genetic manipulations (pages 561–569)

M. Manohar, T. Shigaki and K. D. Hirschi


RESEARCH PAPERS

Does facilitating pollinator learning impede deceptive orchid attractiveness? A multi-approach test of avoidance learning (pages 570–575)

N. Juillet, C. C. Salzmann and G. Scopece


Reproductive biology of Trichocentrum pumilum: an orchid pollinated by oil-collecting bees (pages 576–581)

E. R. Pansarin and L. M. Pansarin


Reproductive biology of two Himalayan alpine gingers (Roscoea spp., Zingiberaceae) in China: pollination syndrome and compensatory floral mechanisms (pages 582–589)

Z.-Q. Zhang, W. J. Kress, W.-J. Xie, P.-Y. Ren, J.-Y. Gao and Q.-J. Li


Actin-dependent deposition of putative endosomes and endoplasmic reticulum during early stages of wound healing in characean internodal cells (pages 590–601)

A. Klima and I. Foissner


Pollen and stigma morphology of some Phaseoleae species (Leguminosae) with different pollinators (pages 602–610)

J. P. Basso-Alves, K. Agostini and S. de Pádua Teixeira


Regulatory interplay of the Sub1A and CIPK15 pathways in the regulation of ?-amylase production in flooded rice plants (pages 611–619)

N. P. Kudahettige, C. Pucciariello, S. Parlanti, A. Alpi and P. Perata


An insight into functional genomics of transgenic lines of tomato cv Rio Grande harbouring yeast halotolerance genes (pages 620–631)

N. Safdar, A. Yasmeen and B. Mirza


Physiology and proteomics of drought stress acclimation in sunflower (Helianthus annuus L.) (pages 632–642)

S. Fulda, S. Mikkat, H. Stegmann and R. Horn


Influence of physico-chemical parameters of the aquatic medium on germination of Eichhornia crassipes seeds (pages 643–648)

E. Albano Pérez, T. Ruiz Téllez and J. M. Sánchez Guzmán


Over-expression of gsh1 in the cytosol affects the photosynthetic apparatus and improves the performance of transgenic poplars on heavy metal-contaminated soil (pages 649–659)

L. A. Ivanova, D. A. Ronzhina, L. A. Ivanov, L. V. Stroukova, A. D. Peuke and H. Rennenberg


Geographic variation in the flood-induced fluctuating temperature requirement for germination in Setaria parviflora seeds (pages 660–666)

F. P. O. Mollard and P. Insausti


Genetic population structure, fitness variation and the importance of population history in remnant populations of the endangered plant Silene chlorantha (Willd.) Ehrh. (Caryophyllaceae) (pages 667–777)

D. Lauterbach, M. Ristow and B. Gemeinholzer


Genetic variation in Mediterranean Helichrysum italicum (Asteraceae; Gnaphalieae): do disjunct populations of subsp. microphyllum have a common origin? (pages 678–687)

M. Galbany-Casals, J. M. Blanco-Moreno, N. Garcia-Jacas, I. Breitwieser and R. D. Smissen


SHORT RESEARCH PAPERS

The protective shell: sclereids and their mechanical function in corollas of some species of Camellia (Theaceae) (pages 688–692)

W. Zhang, X.-Q. Wang and Z.-Y. Li


Development of glutathione-deficient embryos in Arabidopsis is influenced by the maternal level of glutathione (pages 693–697)

B. Lim, A. J. Meyer and C. S. Cobbett


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Plant Biology - 13 (5), 2011



Contents:

REVIEW ARTICLE


Signalling by the global regulatory molecule ppGpp in bacteria and chloroplasts of land plants (pages 699–709)

Y. Tozawa and Y. Nomura


RESEARCH PAPERS


Identification of an Arabidopsis solute carrier critical for intracellular transport and inter-organ allocation of molybdate (pages 710–718)

A. Gasber, S. Klaumann, O. Trentmann, A. Trampczynska, S. Clemens, S. Schneider, N. Sauer, I. Feifer, F. Bittner, R. R. Mendel and H. E. Neuhaus


Transcriptional regulation of two RTE-like genes of carnation during flower senescence and upon ethylene exposure, wounding treatment and sucrose supply (pages 719–724)

Y. Yu, H. Wang, J. Liu, Z. Fu, J. Wang and J. Liu


Plant U-box armadillo repeat proteins AtPUB18 and AtPUB19 are involved in salt inhibition of germination in Arabidopsis (pages 725–730)

J. Bergler and S. Hoth


Influence of EARLI1-like genes on flowering time and lignin synthesis of Arabidopsis thaliana (pages 731–739)

Y. Shi, X. Zhang, Z.-Y. Xu, L. Li, C. Zhang, M. Schläppi and Z.-Q. Xu


Accumulation of human EGF in nectar of transformed plants of Nicotiana langsdorffii × N. sanderae and transfer to honey by bees (pages 740–746)

J. P. F. G. Helsper, C. P. Ruyter-Spira, P. H. S. Kwakman, W. K. Bleeker, L. C. P. Keizer, J. B. Bade, A. A. Te Velde, S. A. J. Zaat, M. Verbeek and J. Creemers-Molenaar


Are nitric oxide donors a valuable tool to study the functional role of nitric oxide in plant metabolism? (pages 747–756)

M. Arasimowicz-Jelonek, J. Floryszak-Wieczorek and A. Kosmala


Redox changes during cold acclimation affect freezing tolerance but not the vegetative/reproductive transition of the shoot apex in wheat (pages 757–766)

A. Soltész, I. Tímár, I. Vashegyi, B. Tóth, T. Kellős, G. Szalai, A. Vágújfalvi, G. Kocsy and G. Galiba


Sugar ratios, glutathione redox status and phenols in the resurrection species Haberlea rhodopensis and the closely related non-resurrection species Chirita eberhardtii (pages 767–776)

D. Djilianov, S. Ivanov, D. Moyankova, L. Miteva, E. Kirova, V. Alexieva, M. Joudi, D. Peshev and W. Van den Ende


The ßI-galactosidase of Cicer arietinum is located in thickened cell walls such as those of collenchyma, sclerenchyma and vascular tissue (pages 777–783)

I. Martín, T. Jiménez, J. Hernández-Nistal, B. Dopico and E. Labrador


Gene expression profiling of Arabidopsis meiocytes (pages 784–793)

P. Libeau, M. Durandet, F. Granier, C. Marquis, R. Berthomé, J. P. Renou, L. Taconnat-Soubirou and C. Horlow


Rhizobial Nod factors are required for cortical cell division in the nodule morphogenetic programme of the Aeschynomeneae legume Arachis (pages 794–800)

F. Ibánez and A. Fabra


The life cycle of the amoeboid alga Synchroma grande (Synchromophyceae, Heterokontophyta) – highly adapted yet equally equipped for rapid diversification in benthic habitats (pages 801–808)

C. Koch, B. Brumme, M. Schmidt, K. Flieger, R. Schnetter and C. Wilhelm


The FLOWERING LOCUS T orthologous gene of Platanus acerifolia is expressed as alternatively spliced forms with distinct spatial and temporal patterns (pages 809–820)

J. Zhang, G. Liu, C. Guo, Y. He, Z. Li, G. Ning, X. Shi and M. Bao


Persistence of sunflower crop traits and fitness in Helianthus petiolaris populations (pages 821–830)

A. Gutierrez, M. Cantamutto and M. Poverene


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Plant Biology - 13 (6), 2011



Contents:

ACUTE VIEW

Is there evidence of optimisation for carbon efficiency in plant proteomes? (pages 831–834)

B. Jankovic, C. Seoighe, M. Alqurashi and C. Gehring


REVIEW ARTICLE

‘Rediscovery’ revised – the cooperation of Erich and Armin von Tschermak-Seysenegg in the context of the ‘rediscovery’ of Mendel’s laws in 1899–1901 (pages 835–841)

M. Simunek, U. Hoßfeld and V. Wissemann


RESEARCH PAPERS

For she that hath, to her shall be given…Implications of flowering in Anemone nemorosa L. (pages 842–847)

M.-B. Pontoppidan, P. M. Petersen and M. Philipp


Pollinator directionality as a response to nectar gradient: promoting outcrossing while avoiding geitonogamy (pages 848–856)

A. Fisogni, G. Cristofolini, M. Rossi and M. Galloni


Pollen limitation and inbreeding depression in an ‘old rare’ bumblebee-pollinated grassland herb (pages 857–864)

T. Becker, N. Voss and W. Durka


Seed longevity and fire: germination responses of an exotic perennial herb in NW Patagonian grasslands (Argentina) (pages 865–871)

J. Franzese and L. Ghermandi


Interactive effects of salinity and phosphorus availability on growth, water relations, nutritional status and photosynthetic activity of barley (Hordeum vulgare L.) (pages 872–880)

O. Talbi Zribi, C. Abdelly and A. Debez


Characterisation and natural variation of a dehydrin gene in Quercus petraea (Matt.) Liebl. (pages 881–887)

B. Vornam, O. Gailing, J. Derory, C. Plomion, A. Kremer and R. Finkeldey


Reproductive allocation and costs in gynodioecious Leucopogon melaleucoides (Ericaceae): implications for the evolution of gender dimorphism (pages 888–895)

G. Vaughton and M. Ramsey


Response of Trifolium repens to UV-B radiation: morphological links to plant productivity and water availability (pages 896–901)

R. W. Hofmann and B. D. Campbell


What is the proximate cause for size-dependent ecophysiological differences in vascular epiphytes? (pages 902–908)

G. Zotz, G. Schmidt and C. Mikona


Salicylic acid negatively affects the response to salt stress in pea plants (pages 909–917)

G. Barba-Espín, M. J. Clemente-Moreno, S. Álvarez, M. F. García-Legaz, J. A. Hernández and P. Díaz-Vivancos


Composition of epiphytic bacterial communities differs on petals and leaves (pages 918–924)

R. R. Junker, C. Loewel, R. Gross, S. Dötterl, A. Keller and N. Blüthgen


Endophytic colonisation of Bacillus subtilis in the roots of Robinia pseudoacacia L. (pages 925–931)

B. Huang, C. Lv, P. Zhuang, H. Zhang and L. Fan


Leaf cuticular n-alkanes as markers in the chemotaxonomy of the eggplant (Solanum melongena L.) and related species (pages 932–939)

Ł. P. Haliński, J. Szafranek and P. Stepnowski


Classification and differentiation of the genus Peganum indigenous to China based on chloroplast trnL-F and psbA-trnH sequences and seed coat morphology (pages 940–947)

T. Zhao, Z.-T. Wang, C. J. Branford-White, H. Xu and C.-H. Wang

Molecular Biology and Evolution - 29 (2), 2012

Contents:

Letters

Ann Demogines, Kimberly A. Truong, and Sara L. Sawyer
Species-Specific Features of DARC, the Primate Receptor for Plasmodium vivax and Plasmodium knowlesi

Joel O. Wertheim, Mathieu Fourment, and Sergei L. Kosakovsky Pond
Inconsistencies in Estimating the Age of HIV-1 Subtypes Due to Heterotachy


Review Article


Sudhir Kumar, Alan J. Filipski, Fabia U. Battistuzzi, Sergei L. Kosakovsky Pond, and Koichiro Tamura
Statistics and Truth in Phylogenomics


Research Articles


Alexander Gusev, Pier Francesco Palamara, Gregory Aponte, Zhong Zhuang, Ariel Darvasi, Peter Gregersen, and Itsik Pe'er
The Architecture of Long-Range Haplotypes Shared within and across Populations

Coen Campsteijn, Jan Inge Ovrebo, Bard Ove Karlsen, and Eric M. Thompson
Expansion of Cyclin D and CDK1 Paralogs in Oikopleura dioica, a Chordate Employing Diverse Cell Cycle Variants

Clément Gilbert, Sharon S. Hernandez, Jaime Flores-Benabib, Eric N. Smith, and Cédric Feschotte
Rampant Horizontal Transfer of SPIN Transposons in Squamate Reptiles

Rebekah L. Rogers and Daniel L. Hartl
Chimeric Genes as a Source of Rapid Evolution in Drosophila melanogaster

Guifré Torruella, Romain Derelle, Jordi Paps, B. Franz Lang, Andrew J. Roger, Kamran Shalchian-Tabrizi, and Inaki Ruiz-Trillo
Phylogenetic Relationships within the Opisthokonta Based on Phylogenomic Analyses of Conserved Single-Copy Protein Domains

Frederick Delfin, Sean Myles, Ying Choi, David Hughes, Robert Illek, Mannis van Oven, Brigitte Pakendorf, Manfred Kayser, and Mark Stoneking
Bridging Near and Remote Oceania: mtDNA and NRY Variation in the Solomon Islands

Erin S. Keebaugh and Todd A. Schlenke
Adaptive Evolution of a Novel Drosophila Lectin Induced by Parasitic Wasp Attack

Melanie Abeysundera, Chris Field, and Hong Gu
Phylogenetic Analysis Based on Spectral Methods

Johan Viklund, Thijs J.G. Ettema, and Siv G.E. Andersson
Independent Genome Reduction and Phylogenetic Reclassification of the Oceanic SAR11 Clade

Krishna R. Veeramah, Daniel Wegmann, August Woerner, Fernando L. Mendez, Joseph C. Watkins, Giovanni Destro-Bisol, Himla Soodyall, Leslie Louie, and Michael F. Hammer
An Early Divergence of KhoeSan Ancestors from Those of Other Modern Humans Is Supported by an ABC-Based Analysis of Autosomal Resequencing Data

Astrid Böhne, Qingchun Zhou, Amandine Darras, Cornelia Schmidt, Manfred Schartl, Delphine Galiana-Arnoux, and Jean-Nicolas Volff
Zisupton—A Novel Superfamily of DNA Transposable Elements Recently Active in Fish

Riyue Bao, Tami Fischer, Renata Bolognesi, Susan J. Brown, and Markus Friedrich
Parallel Duplication and Partial Subfunctionalization of ß-Catenin/Armadillo during Insect Evolution

Minh Anh Thi Nguyen, Tanja Gesell, and Arndt von Haeseler
ImOSM: Intermittent Evolution and Robustness of Phylogenetic Methods

Jonathan M. Flowers, Jeanmaire Molina, Samara Rubinstein, Pu Huang, Barbara A. Schaal, and Michael D. Purugganan
Natural Selection in Gene-Dense Regions Shapes the Genomic Pattern of Polymorphism in Wild and Domesticated Rice

Yi-Chieh Wu, Matthew D. Rasmussen, and Manolis Kellis
Evolution at the Subgene Level: Domain Rearrangements in the Drosophila Phylogeny

Eric D. Crandall, Elizabeth J. Sbrocco, Timery S. DeBoer, Paul H. Barber, and Kent E. Carpenter
Expansion Dating: Calibrating Molecular Clocks in Marine Species from Expansions onto the Sunda Shelf Following the Last Glacial Maximum

Alex Dornburg, Matthew C. Brandley, Michael R. McGowen, and Thomas J. Near
Relaxed Clocks and Inferences of Heterogeneous Patterns of Nucleotide Substitution and Divergence Time Estimates across Whales and Dolphins (Mammalia: Cetacea)

Ning Wang, Edward L. Braun, and Rebecca T. Kimball
Testing Hypotheses about the Sister Group of the Passeriformes Using an Independent 30-Locus Data Set

Wai Lok Sibon Li and Alexei J. Drummond
Model Averaging and Bayes Factor Calculation of Relaxed Molecular Clocks in Bayesian Phylogenetics

Sen Xu, Sarah Schaack, Amanda Seyfert, Eunjin Choi, Michael Lynch, and Melania E. Cristescu
High Mutation Rates in the Mitochondrial Genomes of Daphnia pulex

Fabrizio Ghiselli, Liliana Milani, Peter L. Chang, Dennis Hedgecock, Jonathan P. Davis, Sergey V. Nuzhdin, and Marco Passamonti
De Novo Assembly of the Manila Clam Ruditapes philippinarum Transcriptome Provides New Insights into Expression Bias, Mitochondrial Doubly Uniparental Inheritance and Sex Determination

Andrew D. Moore and Erich Bornberg-Bauer
The Dynamics and Evolutionary Potential of Domain Loss and Emergence

Shohei Takuno, Tomoyuki Kado, Ryuichi P. Sugino, Luay Nakhleh, and Hideki Innan
Population Genomics in Bacteria: A Case Study of Staphylococcus aureus

Elena Carnero-Montoro, Lizette Bonet, Johannes Engelken, Torsten Bielig, Mario Martínez-Florensa, Francisco Lozano, and Elena Bosch
Evolutionary and Functional Evidence for Positive Selection at the Human CD5 Immune Receptor Gene

Joanne K. Hobbs, Charis Shepherd, David J. Saul, Nicholas J. Demetras, Svend Haaning, Colin R. Monk, Roy M. Daniel, and Vickery L. Arcus
On the Origin and Evolution of Thermophily: Reconstruction of Functional Precambrian Enzymes from Ancestors of Bacillus

Julie Jaquiéry, Solenn Stoeckel, Claude Rispe, Lucie Mieuzet, Fabrice Legeai, and Jean-Christophe Simon
Accelerated Evolution of Sex Chromosomes in Aphids, an X0 System

Jeffrey A. Fawcett, Pierre Rouzé, and Yves Van de Peer
Higher Intron Loss Rate in Arabidopsis thaliana Than A. lyrata Is Consistent with Stronger Selection for a Smaller Genome

Jian-Hong Xu, Jeffrey L. Bennetzen, and Joachim Messing
Dynamic Gene Copy Number Variation in Collinear Regions of Grass Genomes

Claudia C. Weber, Catherine J. Pink, and Laurence D. Hurst
Late-Replicating Domains Have Higher Divergence and Diversity in Drosophila melanogaster


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Molecular Biology and Evolution - 29 (1), 2012

Contents:

Letters

Eyal Privman, Osnat Penn, and Tal Pupko
Improving the Performance of Positive Selection Inference by Filtering Unreliable Alignment Regions

Gustavo C. S. Kuhn, Heinrich Küttler, Orlando Moreira-Filho, and John S. Heslop-Harrison
The 1.688 Repetitive DNA of Drosophila: Concerted Evolution at Different Genomic Scales and Association with Genes

José M. Ranz, Carlos Díaz-Castillo, and Rita Petersen
Conserved Gene Order at the Nuclear Periphery in Drosophila

José M. Cuevas, Pilar Domingo-Calap, and Rafael Sanjuán
The Fitness Effects of Synonymous Mutations in DNA and RNA Viruses

Ashley Farlow, Marlies Dolezal, Liushuai Hua, and Christian Schlötterer
The Genomic Signature of Splicing-Coupled Selection Differs between Long and Short Introns

Marta Melé, Asif Javed, Marc Pybus, Pierre Zalloua, Marc Haber, David Comas, Mihai G. Netea, Oleg Balanovsky, Elena Balanovska, Li Jin, Yajun Yang, R. M. Pitchappan, G. Arunkumar, Laxmi Parida, Francesc Calafell, Jaume Bertranpetit, and the Genographic Consortium
Recombination Gives a New Insight in the Effective Population Size and the History of the Old World Human Populations

Thomas Städler, Ana Marcela Florez-Rueda, and Margot Paris
Testing for “Snowballing” Hybrid Incompatibilities in Solanum: Impact of Ancestral Polymorphism and Divergence Estimates

Tuan A. Nguyen, Jasmina Brescic, David J. Vinyard, Thenappan Chandrasekar, and G. Charles Dismukes
Identification of an Oxygenic Reaction Center psbADC Operon in the Cyanobacterium Gloeobacter violaceus PCC 7421

C. Rune Stensvold, Marianne Lebbad, and C. Graham Clark
Last of the Human Protists: The Phylogeny and Genetic Diversity of Iodamoeba


Research Articles


Scott W. Roy, Andrew J. Hudson, Joella Joseph, Janet Yee, and Anthony G. Russell
Numerous Fragmented Spliceosomal Introns, AT–AC Splicing, and an Unusual Dynein Gene Expression Pathway in Giardia lamblia

Tami R. McDonald, Fred S. Dietrich and François Lutzoni
Multiple Horizontal Gene Transfers of Ammonium Transporters/Ammonia Permeases from Prokaryotes to Eukaryotes: Toward a New Functional and Evolutionary Classification

Jonathan E. Dickerson and David L. Robertson
On the Origins of Mendelian Disease Genes in Man: The Impact of Gene Duplication

Ryuichi P. Sugino and Hideki Innan
Natural Selection on Gene Order in the Genome Reorganization Process After Whole-Genome Duplication of Yeast

Zhenguo Lin and Wen-Hsiung Li
Evolution of 5' Untranslated Region Length and Gene Expression Reprogramming in Yeasts

Xinjiang Cai and David E. Clapham
Ancestral Ca2+ Signaling Machinery in Early Animal and Fungal Evolution

Chad D. Huff, David J. Witherspoon, Yuhua Zhang, Chandler Gatenbee, Lee A. Denson, Subra Kugathasan, Hakon Hakonarson, April Whiting, Chadwick T. Davis, Wilfred Wu, Jinchuan Xing, W. Scott Watkins, Michael J. Bamshad, Jonathan P. Bradfield, Kazima Bulayeva, Tatum S. Simonson, Lynn B. Jorde, and Stephen L. Guthery
Crohn’s Disease and Genetic Hitchhiking at IBD5

Felicity Alcock, Chaille T. Webb, Pavel Dolezal, Victoria Hewitt, Miguel Shingu-Vasquez, Vladimir A. Likić, Ana Traven, and Trevor Lithgow
A Small Tim Homohexamer in the Relict Mitochondrion of Cryptosporidium

David Alvarez-Ponce, Sara Guirao-Rico, Dorcas J. Orengo, Carmen Segarra, Julio Rozas, and Montserrat Aguadé
Molecular Population Genetics of the Insulin/TOR Signal Transduction Pathway: A Network-Level Analysis in Drosophila melanogaster

Andrew Ying-Fei Chang and Ben-Yang Liao
DNA Methylation Rebalances Gene Dosage after Mammalian Gene Duplications

Masato Yamamichi, Jun Gojobori, and Hideki Innan
An Autosomal Analysis Gives No Genetic Evidence for Complex Speciation of Humans and Chimpanzees

Jerome H. L. Hui, Carmel McDougall, Ana S. Monteiro, Peter W. H. Holland, Detlev Arendt, Guillaume Balavoine, and David E. K. Ferrier
Extensive Chordate and Annelid Macrosynteny Reveals Ancestral Homeobox Gene Organization

Emily S. W. Wong, Anthony T. Papenfuss, Camilla M. Whittington, Wesley C. Warren, and Katherine Belov
A Limited Role for Gene Duplications in the Evolution of Platypus Venom

Noa E. Cohen, Roy Shen, and Liran Carmel
The Role of Reverse Transcriptase in Intron Gain and Loss Mechanisms

Feng-Chi Chen, Chia-Lin Pan, and Hsuan-Yu Lin
Independent Effects of Alternative Splicing and Structural Constraint on the Evolution of Mammalian Coding Exons

Martin J. Genner and George F. Turner
Ancient Hybridization and Phenotypic Novelty within Lake Malawi’s Cichlid Fish Radiation

Miguel Arenas, Nicolas Ray, Mathias Currat, and Laurent Excoffier
Consequences of Range Contractions and Range Shifts on Molecular Diversity

Shohei Takuno and Brandon S. Gaut
Body-Methylated Genes in Arabidopsis thaliana Are Functionally Important and Evolve Slowly

Alex Wong, Michael Turchin, Mariana F. Wolfner, and Charles F. Aquadro
Temporally Variable Selection on Proteolysis-Related Reproductive Tract Proteins in Drosophila

Deena Emera, Claudio Casola, Vincent J. Lynch, Derek E. Wildman, Dalen Agnew, and Günter P. Wagner
Convergent Evolution of Endometrial Prolactin Expression in Primates, Mice, and Elephants Through the Independent Recruitment of Transposable Elements

Irene Gallego Romero, Chandana Basu Mallick, Anke Liebert, Federica Crivellaro, Gyaneshwer Chaubey, Yuval Itan, Mait Metspalu, Muthukrishnan Eaaswarkhanth, Ramasamy Pitchappan, Richard Villems, David Reich, Lalji Singh, Kumarasamy Thangaraj, Mark G. Thomas, Dallas M. Swallow, Marta Mirazón Lahr, and Toomas Kivisild
Herders of Indian and European Cattle Share Their Predominant Allele for Lactase Persistence

Julian P. Venables, Emmanuel Vignal, Stephen Baghdiguian, Philippe Fort, and Jamal Tazi
Tissue-Specific Alternative Splicing of Tak1 Is Conserved in Deuterostomes

Stefan Zoller and Adrian Schneider
A New Semiempirical Codon Substitution Model Based on Principal Component Analysis of Mammalian Sequences

David Weetman, Craig S. Wilding, Keith Steen, Joao Pinto, and Martin J. Donnelly
Gene Flow–Dependent Genomic Divergence between Anopheles gambiae M and S Forms

Michiel Kwantes, Daniela Liebsch, and Wim Verelst
How MIKC* MADS-Box Genes Originated and Evidence for Their Conserved Function Throughout the Evolution of Vascular Plant Gametophytes

Federico G. Hoffmann, Juan C. Opazo, and Jay F. Storz
Whole-Genome Duplications Spurred the Functional Diversification of the Globin Gene Superfamily in Vertebrates

Eva Nováková and Nancy A. Moran
Diversification of Genes for Carotenoid Biosynthesis in Aphids following an Ancient Transfer from a Fungus

Bruce Rannala, Tianqi Zhu, and Ziheng Yang
Tail Paradox, Partial Identifiability, and Influential Priors in Bayesian Branch Length Inference

Naoki Osada and Hiroshi Akashi
Mitochondrial–Nuclear Interactions and Accelerated Compensatory Evolution: Evidence from the Primate Cytochrome c Oxidase Complex

Tanja Stadler, Roger Kouyos, Viktor von Wyl, Sabine Yerly, Jürg Böni, Philippe Bürgisser, Thomas Klimkait, Beda Joos, Philip Rieder, Dong Xie, Huldrych F. Günthard, Alexei J. Drummond, Sebastian Bonhoeffer, and the Swiss HIV Cohort Study
Estimating the Basic Reproductive Number from Viral Sequence Data

Bayazit Yunusbayev, Mait Metspalu, Mari Järve, Ildus Kutuev, Siiri Rootsi, Ene Metspalu, Doron M. Behar, Kärt Varendi, Hovhannes Sahakyan, Rita Khusainova, Levon Yepiskoposyan, Elza K. Khusnutdinova, Peter A. Underhill, Toomas Kivisild, and Richard Villems
The Caucasus as an Asymmetric Semipermeable Barrier to Ancient Human Migrations

Andrew E. Allen, Ahmed Moustafa, Anton Montsant, Angelika Eckert, Peter G. Kroth, and Chris Bowler
Evolution and Functional Diversification of Fructose Bisphosphate Aldolase Genes in Photosynthetic Marine Diatoms

Philippe Fort,Aurélie Albertini, Aurélie Van - Hua, Arnaud Berthomieu, Stéphane Roche, Frédéric Delsuc, Nicole Pasteur, Pierre Capy, Yves Gaudin, and Mylene Weill
Fossil Rhabdoviral Sequences Integrated into Arthropod Genomes: Ontogeny, Evolution, and Potential Functionality

Daniel Rejmanek, Patrick Foley, Anthony Barbet, and Janet Foley
Evolution of Antigen Variation in the Tick-Borne Pathogen Anaplasma phagocytophilum

Lee Henry, Tanja Schwander, and Bernard J. Crespi
Deleterious Mutation Accumulation in Asexual Timema Stick Insects

Alessandro Lovisetto, Flavia Guzzo, Alice Tadiello, Ketti Toffali, Alessandro Favretto, and Giorgio Casadoro
Molecular Analyses of MADS-Box Genes Trace Back to Gymnosperms the Invention of Fleshy Fruits

Maria Costantini, Fabio Auletta, and Giorgio Bernardi
The Distributions of “New” and “Old” Alu Sequences in the Human Genome: The Solution of a “Mystery”

Yudai Okuyama, Akifumi S. Tanabe, and Makoto Kato
Entangling Ancient Allotetraploidization in Asian Mitella: An Integrated Approach for Multilocus Combinations


Editorial

Ken Wolfe, Marta L. Wayne, Kateryna Makova, Tomoko Y. Steen, Marcy Uyenoyama, and Naoyuki Takahata
SMBE Proposal to the Government of Japan


Corrigendum

Comparing Models of Evolution for Ordered and Disordered Proteins

Standing Material

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Pakistan Journal of Botany - 44 (1), 2012

Contents:
1. Population structure, spatial pattern and reproductive capacity of two semi-desert undershrubs Senna holosericea and Fagonia indica in southern Sindh, Pakistan
S. Shahid Shaukat, Seemi Aziz, Waqar Ahmed and Atif Shahzad

2. Analyzing the herbaceous flora of Lohi Bher Wildlife Park under variable environmental stress
Sheikh Saeed Ahmad and Huma Ehsan

3. Phytodiversity and endemic richness of Karambar lake vegetation from Chitral, Hindukush-Himalayas
Hamayun Shaheen and Zabta Khan Shinwari

4. Ecological analysis of the grassland flora in the riparian zone of Okanj Oxbow Lake (Vojvodina, Serbia)
A. Knežević, D. Džigurski, B. Ljevnaić-Mašić and D. Milić

5. Contribution to the red list of Pakistan: a case study of Delphinium nordhagenii (Ranunculaceae)
Haidar Ali, M. Qaiser and K.B. Marwat

6. Trichome micromorphology of Egyptian ballota (Lamiaceae) with emphasis on its systematic implication
A.K. Osman

7. Evaluation of sorghum varieties/lines for salt tolerance using physiological indices as screening tool
Abida Kausar, M. Yasin Ashraf, Iftikhar Ali, M. Niaz and Qaiser Abbass

8. Salt-induced variation in some potential physio-chemical attributes of two genetically diverse spring wheat (Triticum aestivum L.) cultivars: photosynthesis and photosystem II efficiency
Muhammad Arslan Ashraf and Muhammad Ashraf

9. An evaluation of water deficit tolerance screening in pigmented indica rice genotypes
Sutee Chutipaijit, Suriyan Cha-um and Kanokporn Sompornpailin

10. Molecular analyses of gladiolus lines with improved resistance against Fusarium wilt
Idrees Ahmad Nasir, Arshad Jamal, Ziaur Rahman and Tayyab Husnain

11. Foliar urea application affects nitric oxide burst and glycinebetaine metabolism in two maize cultivars under drought
Lixin Zhang, Xifeng Zhang, Kai Wang, Yonggui Zhao, Youya Zhai, Mei Gao, Zhenfeng An, Jianchao Liu and Jinjiang Hu

12. Vigna radiata root associated mycorrhizae and their helping bacteria for improving crop productivity
Tahira Yasmeen, Sohail Hameed, Mohsin Tariq and Javed Iqbal

13. The inhibition of polymerization of glucose in carbohydrate under Cu stress in Vigna radiata
Rafia Azmat and Sana Riaz

14. Evaluation of ambient air pollution effects on three cultivars of sesame (Sesamum indicum L.) by using ethylenediurea
Abdul Wahid, Sheikh Saeed Ahmad, Yuechun Zhao and J.N.B. Bell

15. Effects of varied irradiance on flowering time of facultative long-day ornamental annuals
Jalal-ud-Din Baloch, M. Munir, M. Abid and M. Iqbal

16. Effect of salicylic acid treatments on storage life of peach fruits cv.. ‘Flordaking’
Muhammad Javed Tareen, Nadeem Akhtar Abbasi and Ishfaq Ahmad Hafiz

17. Different growing conditions affect nutrient content, fruit yield and growth in strawberry
Leyla Demirsoy, Hüsnü Demirsoy and Gülden Balci

18. Efficacy of Bio-K fertilizer on the growth and sugar content of sugarcane plants
S. Tahir Abbas, Rahila Nazli, Bushra Nawab and R.M. Tariq

19. Effect of picking dates on seed germination, GIN turn-out, seed index and staple length in Gossypium hirsutum L.
Zaheer Ahmed Deho, S. Laghari, S. Abro, M.A. Arain, M. Hussain, S.A. Abro and Fakhruddin

20. Radiation and nitrogen use efficiencies of C3 winter cereals to nitrogen split application
S. Ahmad, H. Ali, M. Ismail, M.I. Shahzad, M. Nadeem. M.A. Anjum, M. Zia-ul-Haq, N. Firdous and M.A. Khan

21. Evaluation of groundnut genotypes under drought stress conditions at Swat Valley
Ayub Khan, Asghari Bano, Jehan Bakht and Nasrullah Jan Malik

22. Appraisal of temporal variation in soil and forage iron and zinc in a pasture under semi-arid environmental conditions
Kafeel Ahmad, Zafar Iqbal Khan, Muhammad Ashraf and Abid Ejaz

23.Preliminary studies on morphological diversity of coconut (Cocos nucifera L.) seedlings by organic and inorganic fertilizer amendments at Karachi, Pakistan
Abdul Hameed Solangi and M. Zafar Iqbal

24. Allelopathic assessment of fresh aqueous extracts of Chenopodium album L., for growth and yield of wheat (Triticum aestivum L.)
Abdul Majeed, Zubeda Chaudhry and Zahir Muhammad

25. Optimization of dilute acid pretreatment using response surface methodology for bioethanol production from cellulosic biomass of rice polish
Zahid Anwar, Muhammad Gulfraz, Muhammad Imran, M. Javaid Asad, Aftab Iqbal Shafi, Pervez Anwar and Rahmatullah Qureshi

26. Substrates effects on growth, yield and quality of Rosa hybrida L.
Iftikhar Ahmad, M. Aslam Khan, M. Qasim, M. Shahzad Zafar and Rashid Ahmad


27. Evaluation of maize S2 lines in test cross combinations II: Yield and yield components
H. Rahman, Arifuddin, Z. Shah, S.M.A. Shah, M. Iqbal and I.H. Khalil

28. Molecular cloning and expression analysis of a NPR1 gene from sugarcane
Jian-Wen Chen, Jian-Fei Kuang, Gang Peng, Si-Bao Wan, Rui Liu, Zhan-Duan Yang and Hai-Hua Deng

29. Determination of processing and nutritional quality attributes of potato genotypes in Pakistan
Ghulam Abbas, I.A. Hafiz, N.A. Abbasi and Azhar Hussain

30. Fruit quality parameters and molecular characterization of some loquat accessions
Aydin Uzun, Ubeyit Seday and Cengiz Turkay

31. Genetic analysis of somaclonal variants and induced mutants of potato (Solanum tuberosum L.) cv. Diamant using RAPD markers
Humera Afrasiab and Javed Iqbal

32. Effect of mycorrhizal inoculation on the growth and phytoextraction of heavy metals by maize grown in oil contaminated soil
Abdul Kabir Khan Achakzai, Mojeed Olaide Liasu and Oladele Johnson Popoola

33. Natural occurrence of aflatoxins, Zearalenone and Trichothecenes in maize grown in Pakistan
Salma Khatoon, Nafeesa Qudsia Hanif, Iffat Tahira, Nighat Sultana, Kishwar Sultana and Najma Ayub

34. Genetic analysis and hybrid vigor study of grain yield and other quantitative traits in autotetraploid rice
Muhammad Qasim Shahid, Xu Hai-Ming, Lin Shun-Quan, Chen Zhi-Xiong, Muhammad Naeem, Li Ya-Juan and Liu Xiang-Dong

35. Expression of genes controlling the inheritance of resistance to cotton leaf curl virus disease (CLCuD) in Gossypium hirsutum L.: A quantitative analysis
Manzoor Hussain, Faqir Muhammad Azhar, Asif Ali Khan and Zulfiqar Ali

36. Correlation and frequency distribution for different parameters among bread wheat (Triticum aestivum L.) accessions
Muhammad Mohibullah, Muhammad Qasim, Malik Ashiq Rabbani, Irfanullah, Muhammad Iqbal, Sadaf Javaria and Manzoor Iqbal Khattak

37. Isolation, characterization, preservation and pathogenicity test of Xanthomonas oryzae PV. oryzae causing BLB disease in rice
Rukhsana Jabeen, T. Iftikhar and Huma Batool

38. Associations of some characters with grain yield in chickpea (Cicer arietinum L.)
Nihal Kayan and M. Sait Adak

39. Characterization of pearl millet germplasm for various morphological and fodder yield parameters
Irfan Ahmed Shah, Hidayat-ur-Rahman, Syed Mehar Ali Shah, Zahir Shah, Ihteramullah and Muhammad Noor

40. Genetic evolution and utilization of wheat germplasm resources in Huanghuai winter wheat region of China
Cheng Xiyong, Xu Haixia, Dong Zhongdong, Chen Feng, Zhan Kehui and Cui Dangqun

41. Rate of nitrogen application influences yield of maize at low and high population in Khyber Pakhtunkhwa, Pakistan
M. Asim, Mohammad Akmal, Ahmad Khan, Farhatullah and Raziuddin

42. An improved Agrobacterium mediated transformation system in wheat
Hamid Rashid, Mohammad Haroon Khan, Zubeda Chaudhry, Raisa Bano and Naveed Iqbal Raja

43. Evolution of new wheat variety NIA-Amber for the general cultivation in Sindh province - a case study
Mahboob Ali Sial, Muhammad Afzal Arain, Khalil Ahmed Laghari and Shamadad Khanzada

44. Walnut biodiversity in south-western Romania-resource for perspective cultivars
Sina Cosmulescu and Mihai Botu

45. Adaptation to polyethylene stress maintains totipotency of cell lines of Oryza sativa L. cv.. Swat-1 for a longer period
Azhar Hussain Shah, Safdar Hussain Shah, Habib Ahmad, Zahoor Ahmad Swati, Fida Muhammad Abbasi, Farhatullah and Abrar Hussain Shah

46. Seasonal and cultivar effects on nodulation potential of soybeans
Asim Muhammad, Shad Khan Khalil, Amir Zaman Khan and Sultan Mehmood Wazir

47. Correlation and path analysis of grain yield and yield components of some Turkish oat genotypes
Ziya Dumlupinar, Rukiye Kara, Tevrican Dokuyucu and Aydin Akkaya

48. Photosynthetic characteristics of an endangered species Camellia nitidissima and its conservation implications
Xiao-Xue Qi, Yun-Sheng Jiang, Xiao Wei, Hui Tang, Zhong-Chen Xiong, Wan-Hui Ye and Zhang-Ming Wang

49. Optimization of lactic acid production from cheap raw material: Sugarcane molasses
Umar Farooq, Faqir Muhammad Anjum, Tahir Zahoor, Sajjad-ur-Rahman, Muhammd Atif Randhawa, Anwaar Ahmed and Kashif Akram

50. Axenically culturing the bryophytes: establishment and propagation of the pleurocarpous moss Thamnobryum alopecurum Nieuwland ex Gangulee (Bryophyta, Neckeraceae) in in vitro conditions
Aneta Sabovljević, Milorad Vujičić, Marijana Skorić, Jasna Bajić-Ljubičić and Marko Sabovljević

51. Direct shoot multiplication in Ochradenus arabicus, an endemic medicinal plant of Saudi Arabia
M. Nadeem, Fahad Al-Qurainy, Salim Khan, M. Tarroum and M. Ashraf

52. A numerical taxonomy of the genus Rosularia (DC.) Stapf from Pakistan and Kashmir
Ghulam Rasool Sarwar and Muhammad Qaiser

53. Biological screening of oils from Impatiens bicolor Royle
Mughal Qayum, Muhammad Nisar, Muhammad Raza Shah, M. Zia-ul-Haq, Waqar Ahmad Kaleem and Inamullah Khan Marwat

54. Screening of commercial wheat varieties to spot blotch under controlled and field conditions
Shamim Iftikhar, Shahzad Asad, Atiq-ur-Rehman Rattu, Anjum Munir and Muhammad Fayyaz

55. Acinetobacter calcoaceticus ameliorated plant growth and influenced gibberellins and functional biochemicals
Sang-Mo Kang, Abdul Latif Khan, Muhammad Hamayun, Zabta Khan Shinwari, Yoon-Ha Kim, Gil-Jae Joo and In-Jung Lee

56. Study of heavy metal pollution in mangrove sediments reference to marine environment along the coastal areas of Pakistan
Manzoor Iqbal Khattak, Mahmood Iqbal Khattak and Muhammad Mohibullah

57. Biodiesel production from algae
G. Khola and B. Ghazala

58. Screening Pakistani cotton for drought tolerance
Muhammad Hussain Soomro, Ghulam Sarwar Markhand and Barkat A. Soomro

59. Anti-emetic activity of some leguminous plants
Muhammad Mohtasheem-ul-Hasan, Iqbal Azhar, S. Muzammil, Salman Ahmed and Syed Waseemuddin Ahmed

60. Production potential of locally isolated strain of Fusarium solani (MBL 24) for extracellular lipases
Tehreema Iftikhar, Mubashir Niaz, Muhammad Anjum Zia, Maneela Sadaf and Rukhsana Jabeen

61. Impact of sawdust using various woods for effective cultivation of oyster mushroom
Nasir Ahmad Khan, M. Ajmal, M. Inam-ul-Haq, Nazir Javed, M. Asif Ali, Rana Binyamin and Sajid Aleem Khan

62. New records of Lactarius species from Pakistan
Abdul Razaq and Saleem Shahzad

63. The seed atlas of Pakistan-VI. Caryophyllaceae
Durdana Kanwal, Rubina Abid and M. Qaiser

64. Effect of Ephedra alata on nucleic acids and nitrogen metabolism of seedborne Aspergillus flavus
Al-Qarawi, A. A., Abd Allah, E. F. and Abeer Hashem

65. Antimicrobial activities of different extracts of Lecanora atra, Lecanora muralis, Parmelia saxatilis, Parmelia sulcata and Parmeliopsis ambigua
Branislav Ranković and Marijana Kosanić

66. Physico-chemical properties, fatty acid profile and antioxidant activity of peanut oil
Muhammad Aslam Shad, Humayun Pervez, Zafar Iqbal Zafar, Haq Nawaz and Hyder Khan

67. Effect of thermally composted culture media on the growth of hyphae from various parts of the basidiocarp of button mushroom, Agaricus bitorquis (Quelet) SACC
Haroon-ur-Rasheed, Saifullah, Fida Mohammad and Khalid Nawab

68. Production of antitumor antibiotic by Streptomyces capoamus
Hamid Mukhtar, Sidra Ijaz and Ikram-ul-Haq

69. Chemical and biological control of Fusarium root rot of okra
Zahoor Ahmad, Saifullah, Fazli Raziq, Hakim Khan and Muhammad Idrees

70. Antimicrobial activity of tobacco (Nicotiana tabacum) using different solvents extracts-I
Jehan Bakht, Azra and Mohammad Shafi

71. Assessment of phytohormones producing capacity of Stenotrophomonas maltophilia SSA and its interaction with Zea mays L.
Irum Naz and Asghari Bano

============

Revista de Biología Tropical - 59 (1), 2011

Contents:


Microbiologia

Variación en la actividad microbiana por cambio de uso en suelos en sabanas, Llanos Orientales, Venezuela
Gómez, Yrma; Paolini, Jorge

Hematología y citoquímica de las células sanguíneas de Rhinella fernandezae (Anura: Bufonidae) en Espinal y Delta-Islas del río Paraná, Argentina
Cabagna Zenklusen, Mariana C; Lajmanovich, Rafael C; Attademo, Andrés M; Peltzer, Paola M; Junges, Celina M; Fiorenza Biancucci, Gabriela; Bassó, Agustín

Plasma concentration of progesterone and 17ß-estradiol of black-rumped agouti (Dasyprocta prymnolopha) during the estrous cycle
Guimaraes, Diva Anelie; Ramos, Rosemar Luz; Ohashi, Otávio Mitio; Garcia, Gary Wayne; Gomes Vale, William

In-vitro predatory activity of nematophagous fungi from Costa Rica with potential use for controlling sheep and goat parasitic nematodes
Soto-Barrientos, Natalia; de Oliveira, Jaqueline; Vega-Obando, Rommel; Montero-Caballero, Danilo; Vargas, Bernardo; Hernández-Gamboa, Jorge; Orozco-Solano, Claudio

Ecologia

Distribución, parámetros poblacionales y dieta de Astropecten marginatus (Asteroidea: Astropectinidae) en el Atlántico venezolano
Ortega, Ileana; Martín, Alberto; Díaz, Yusbelly

Population structure and stock assessment of Hoplias malabaricus (Characiformes: Erythrinidae) caught by artisanal fishermen in river-reservoir transition area in Brazil
Costa Novaes, José Luís; Carvalho, Edmir Daniel

Quality and digestibility of food ingested by various trophic fish groups in the Upper Paraná River floodplain
Esper Amaro de Faria, Anna Christina; Benedito, Evanilde

Cambios en la vegetación durante el Holoceno en la región Norte del Iberá, Corrientes, Argentina
Fernández Pacella, Lionel; Garralla, Silvina; Anzótegui, Luisa


Invertebrados acuaticos

Descomposición de hojarasca y liberación de nutrientes en plantaciones de Acacia mangium (Mimosaceae) establecidas en suelos degradados de Colombia
Castellanos-Barliza, Jeiner; León Peláez, Juan Diego

Diversidad y microestructura de quitones (Mollusca: Polyplacophora) del Caribe de Costa Rica
García-Ríos, Cedar I; Álvarez-Ruiz, Migdalia

Ciclo reproductivo del ostión de manglar Crassostrea rhizophorae (Bivalvia: Ostreidae) en la Bahía de Camamu, Bahia, Brasil
Lenz, Tiago; Boehs, Guisla

Relación entre las capturas de Megapitaria squalida (Bivalvia: Veneridae) y la temperatura superficial del mar en la Bahía de la Paz, Baja California Sur, México
Vázquez Hurtado, Mariana; Manzano Sarabia, Marlenne; Ortega Rubio, Alfredo

Growth estimation of mangrove cockle Anadara tuberculosa (Mollusca: Bivalvia): application and evaluation of length-based methods
Flores, Luis A

Perfil de lípidos y ácidos grasos de Perna viridis, mejillón verde (Mollusca: Bivalvia) en el oriente venezolano y la costa oeste de Trinidad
Koftayan, Tamar; Milano, Jahiro; D?Armas, Haydelba; Salazar, Gabriel

Efecto de bacterias probióticas en el cultivo larvario del ostión de placer Crassostrea corteziensis (Bivalvia: Ostreidae)
Campa-Córdova, Angel Isidro; Luna-González, Antonio; Mazón-Suastegui, José Manuel; Aguirre-Guzmán, Gabriel; Ascencio, Felipe; González-Ocampo, Héctor Abelardo

On Mellitella stokesii and Amphipholis geminata (Echinodermata), from an intertidal flat in the upper Gulf of Nicoya estuary, Pacific, Costa Rica
Vargas, José A; Solano, Sylvia

Effects of salinity on growth and survival in five Artemia franciscana (Anostraca: Artemiidae) populations from Mexico Pacific Coast
Castro-Mejía, Jorge; Castro-Barrera, Talía; Hernández-Hernández, Luis Héctor; Arredondo-Figueroa, José Luis; Castro-Mejía, Germán; de Lara-Andrade, Ramón

Influencia del ciclo lunar en la captura de langosta espinosa Panulirus argus (Decapoda: Palinuridae) en el Golfo de Batabanó, Cuba
Lopeztegui, Alexander; Baisre, Julio A; Capetillo, Norberto


Vertebrados acuaticos

Reproducción del pez erizo, Diodon holocanthus (Pisces: Diodontidae) en la plataforma continental del Pacífico Central Mexicano
Lucano-Ramírez, Gabriela; Pena-Pérez, Edith; Ruiz-Ramírez, Salvador; Rojo-Vázquez, Jorge; González-Sansón, Gaspar

Long-term comparison of the fish community in a Costa Rican rocky shore marine reserve
Myers, Mark C; Wagner, Jonathan; Vaughan, Christopher

Clave ilustrada de los peces chilenos de la familia Serranidae (Teleostei: Perciformes)
Pequeno, Germán; Rojas M, José Rodrigo; Sáez, Sylvia

Distribución latitudinal y batimétrica de las especies más abundantes y frecuentes en la fauna acompanante del camarón del Golfo de California, México
Rábago-Quiroz, CarlosHiram; López-Martínez, Juana; Eduardo Valdez-Holguín, José; Nevárez Martínez, Manuel O

Variabilidad genética de Brycon henni (Characiformes: Characidae) en la cuenca media de los ríos Nare y Guatapé, sistema Río Magdalena, Colombia
Hurtado-Alarcón, Julio César; Mancera-Rodríguez, Néstor J; Saldamando-Benjumea, Clara I

Cetáceos de las aguas costeras del Pacífico norte y sur de Costa Rica
Martínez-Fernández, Damián; Montero-Cordero, Andrea; May-Collado, Laura


Invertebrados terrestres

Copulatory behaviour and the process of intromission in Anastrepha ludens (Diptera: Tephritidae)
Briceno, R.D; Orozco, Dina; Luis Quintero, J; Hanson, Paul; Hernández, Ma. del Refugio

Diversidad del orden Lepidoptera (Hesperioidea y Papilionoidea) de la ciudad Corrientes, Argentina
Lazzeri, María Gabriela; Bar, María Esther; Pieri Damborsky, Miryam

Karyotype and male pre-reductional meiosis of the sharpshooter Tapajosa rubromarginata (Hemiptera: Cicadellidae)
de Bigliardo, Graciela R; Virla, Eduardo Gabriel; Caro, Sara; Murillo Dasso, Santiago

Distribución y diversidad de colémbolos (Hexapoda: Collembola) en el gradiente altitudinal de un bosque templado en México
García-Gómez, Arturo; Castano-Meneses, Gabriela; Palacios-Vargas, José G


Vertebrados terrestres

Registro histórico de Gastrotheca ovifera (Anura: Hemiphractidae): evidencias de disminución en selvas nubladas de la Cordillera de la Costa venezolana
Valera-Leal, Javier; Acevedo, Aldemar; Pérez-Sánchez, Antonio; Vega, Jorge; Manzanilla, Jesús

Thermal parameters changes in males of Rhinella arenarum (Anura:Bufonidae) related to reproductive periods
Sanabria, Eduardo Alfredo; Quiroga, Lorena Beatriz

Los cromosomas meióticos de la rana arborícola Smilisca baudinii (Anura: Hylidae)
Hernández-Guzmán, Javier; Arias-Rodriguez, Lenin; Rimber Indy, Jeane

Inicio de la época reproductiva y tiempo de defensa del territorio en machos de Colinus leucopogon (Galliformes: Odontophoridae)
Sandoval, Luis

Fototrampeo de mamíferos en la Sierra Nanchititla, México: abundancia relativa y patrón de actividad
Monroy-Vilchis, Octavio; Zarco-González, Martha M; Rodríguez-Soto, Clarita; Soria-Díaz, Leroy; Urios, Vicente


Botanica

Impacto por huracanes en las praderas de Thalassia testudinum (Hydrocharitaceae) en el Caribe Mexicano
Arellano-Méndez, Leonardo U; Liceaga-Correa, María de los Ángeles; Herrera-Silveira, Jorge A; Hernández-Núnez, Héctor

Biometry of stomata in Blechnum species (Blechnaceae) with some taxonomic and ecological implications for the ferns
Gabriel y Galán, José María; Prada, Carmen; Rolleri, Cristina H; Lahoz-Beltrá, Rafael; Martínez-Calvo, Cristina

Presencia, abundancia y estrategias reproductivas de helechos en áreas alteradas de la Sierra Nevada, México
Rodríguez Romero, Ma. Lucía; Zavala Hurtado, José Alejandro; Pacheco, Leticia

Factors influencing rapid clonal propagation of Chlorophytum arundinaceum (Liliales: Liliaceae), an endangered medicinal plant
Samantaray, Sanghamitra; Maiti, Satyabrata

In vitro rhizogenesis: histoanatomy of Cedrela odorata (Meliaceae) microcuttings
Millán-Orozco, Liliana; Corredoira, Elena; San José, Maria del Carmen

Diversity and composition of understory vegetation in the tropical seasonal rain forest of Xishuangbanna, SW China
Xiao-Tao, Lü; Jiang-Xia, Yin; Jian-Wei, Tang

Efecto antioxidante y contenido polifenólico de Syringodium filiforme (Cymodoceaceae)
González García, Kethia L; Valdés Iglesias, Olga; Laguna, Abilio; Díaz Martínez, Maylín; González Lavaut, José Antonio

Anatomía microscópica y metabolitos secundarios volátiles en tres estadios del desarrollo de las inflorescencias de Lantana camara (Verbenaceae)
Caroprese Araque, José Fernando; Parra Garcés, María Isabel; Arrieta Prieto, Dagoberto; Stashenko, Elena

Phagodeterrence by Quassia amara (Simaroubaceae) wood extract fractions on Hypsipyla grandella (Lepidoptera: Pyralidae) larvae
Soto, Francisco; Hilje, Luko; Mora, Gerardo A; Carballo, Manuel

Dinoflagelados (Dinophyta) de los órdenes Prorocentrales y Dinophysiales del Sistema Arrecifal Veracruzano, México
Parra-Toriz, Dulce; Ramírez-Rodríguez, María de Lourdes Araceli; Hernández-Becerril, David Uriel


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Flora of Thailand - 10 (1-4), 2009-2011

Volume 10(1)/2009:
Dioscoreaceae


Volume 10(2)/2010:
Celastraceae, Hernandiaceae, Leeaceae, Mastrixiaceae, Passifloraceae, Verbenaceae


Volume 10(3):
Anacardiaceae, Convolvulaceae


Volume 10(4):
Cecropiaceae, Moraceae


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POLITYKA I NIE TYLKO , PRZEPISY KULINARNE , ULUBIONE KSIĄŻKI , DOWCIPY , GEOGRAFIA , ŚWIEBODZICE , FORUM O RODZAJU HOYA , PEUGEOT , TWOJE CENTRUM FINANSOWE , PiS , PLATFORMA OBYWATELSKA

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PLANT - FAMILY - FLOWER - GENERA - JOURNAL - ARTICOLO - PLANTS - PIANTE - ČLÁNEK - ABSTRAKT - STRESZCZENIE - ABSTRAKTNÍ - ABSTRAKT - RÉSUMÉ - RESUMEN - ANOTACIJA - ZUSAMMENFASSUNG - SAMMANFATTNING - PHOTO – FOTOGRAFIA – FOTKA – IMAGE – TAXON - GENUS - ARTÍCULO - ARTIKEL - ARTIGO - CIKKET - NENI - ARTIKULO - ARTIKLA - GR - STRAIPSNIS - PANTS - BOTANIQUE - ROŚLINY - SINONIM - FAMIGLIA - BOTANY - NAUKA - SINONIMO - BOTANICA - WYCIECZKA - TRAVEL - SINÓNIMO - DOCTOR - FRUIT - ARTICOLO - SYNONIEM - CZASOPISMO - SYNONYM - DOKTOR - SYNONYME - SYSTEMATIC - SYSTEMATYKA - SZINONIMA - PROFESOR - RODZINA - ARTYKUŁ - ARTICLE - FLOWER - KWIATY - OWOC - SEEDS - NASIONA - CULTIVATION - USE - WATERING - PROPAGATION - PESTSM - DISEASES - FERTILIZATION - HOUSE - GARDEN - BOWL - KWITNIENIE - FLOWERBED - SOIL - POND - MARSH - SPECIES - HYBRIDS - VEGETABLE GARDEN - UPRAWA - ZASTOSOWANIE - PODLEWANIE - ROZMNAŻANIE - SZKODNIKI - CHOROBY - NAWOŻENIE - ROŚLINY DOMOWE - ROŚLINY BALKONOWE - ROŚLINY TARASOWE - OGRÓD - PRACA NAUKOWA - POJEMNIK - SUBSTRAT - PODŁOŻE - KERAMZYT - GLINA - TORF - DONICA - DONICZKA - ZIEMIA - RABATA - GLEBA - ROŚLINY WODNE - STAW - WODA - ROŚLINY BAGIENNE - OWOCE - WARZYWA - SPRZEDAŻ ROŚLIN - GATUNKI - MIESZAŃCE - CV - KULTYWARY

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Molecular Biology and Evolution - 27 (11), 2010

Contents:

Letters

Armando Geraldes, Teri Rambo, Rod A. Wing, Nuno Ferrand and Michael W. Nachman
Extensive Gene Conversion Drives the Concerted Evolution of Paralogous Copies of the SRY Gene in European Rabbits

Shira Omer, Amir Kovacs, Yuval Mazor and Uri Gophna
Integration of a Foreign Gene into a Native Complex Does Not Impair Fitness in an Experimental Model of Lateral Gene Transfer

Chungoo Park, Laura Carrel and Kateryna D. Makova
Strong Purifying Selection at Genes Escaping X Chromosome Inactivation

Research Articles

Karen Meusemann, Björn M. von Reumont, Sabrina Simon, Falko Roeding, Sascha Strauss, Patrick Kück, Ingo Ebersberger, Manfred Walzl, Günther Pass, Sebastian Breuers, Viktor Achter, Arndt von Haeseler, Thorsten Burmester, Heike Hadrys, J. Wolfgang Wägele and Bernhard Misof
A Phylogenomic Approach to Resolve the Arthropod Tree of Life

Ovidiu Paun, Richard M. Bateman, Michael F. Fay, Mikael Hedrén, Laure Civeyrel and Mark W. Chase
Stable Epigenetic Effects Impact Adaptation in Allopolyploid Orchids (Dactylorhiza: Orchidaceae)

Henk C. den Bakker, Nicholas W. VanKuren, Joseph B. Morton and Teresa E. Pawlowska
Clonality and Recombination in the Life History of an Asexual Arbuscular Mycorrhizal Fungus

Abhijit Sanyal, Jetty S.S. Ammiraju, Fei Lu, Yeisoo Yu, Teri Rambo, Jennifer Currie, Kristi Kollura, Hye-Ran Kim, Jinfeng Chen, Jianxin Ma, Phillip San Miguel, Chen Mingsheng, Rod A. Wing and Scott A. Jackson
Orthologous Comparisons of the Hd1 Region across Genera Reveal Hd1 Gene Lability within Diploid Oryza Species and Disruptions to Microsynteny in Sorghum

Harald O. Letsch, Patrick Kück, Roman R. Stocsits and Bernhard Misof
The Impact of rRNA Secondary Structure Consideration in Alignment and Tree Reconstruction: Simulated Data and a Case Study on the Phylogeny of Hexapods

Kazuhiko Ohshima and Kumiko Igarashi
Inference for the Initial Stage of Domain Shuffling: Tracing the Evolutionary Fate of the PIPSL Retrogene in Hominoids

Anders Albrechtsen, Finn Cilius Nielsen and Rasmus Nielsen
Ascertainment Biases in SNP Chips Affect Measures of Population Divergence

Sean Chun-Chang Chen, Feng-Chi Chen and Wen-Hsiung Li
Phosphorylated and Nonphosphorylated Serine and Threonine Residues Evolve at Different Rates in Mammals

Matteo Fumagalli, Rachele Cagliani, Stefania Riva, Uberto Pozzoli, Mara Biasin, Luca Piacentini, Giacomo P. Comi, Nereo Bresolin, Mario Clerici and Manuela Sironi
Population Genetics of IFIH1: Ancient Population Structure, Local Selection, and Implications for Susceptibility to Type 1 Diabetes

Simon C. Lovell and David L. Robertson
An Integrated View of Molecular Coevolution in Protein–Protein Interactions

Jun G. Inoue, Masaki Miya, Kevin Lam, Boon-Hui Tay, Janine A. Danks, Justin Bell, Terrence I. Walker and Byrappa Venkatesh
Evolutionary Origin and Phylogeny of the Modern Holocephalans (Chondrichthyes: Chimaeriformes): A Mitogenomic Perspective

Francesca Tria, Emanuele Caglioti, Vittorio Loreto and Andrea Pagnani
A Stochastic Local Search Algorithm for Distance-Based Phylogeny Reconstruction

Erin M. Hill-Burns and Andrew G. Clark
Functional Regulatory Divergence of the Innate Immune System in Interspecific Drosophila Hybrids

Katja Nowick, Aaron T. Hamilton, Huimin Zhang and Lisa Stubbs
Rapid Sequence and Expression Divergence Suggest Selection for Novel Function in Primate-Specific KRAB-ZNF Genes

Romain A. Studer and Marc Robinson-Rechavi
Large-Scale Analysis of Orthologs and Paralogs under Covarion-Like and Constant-but-Different Models of Amino Acid Evolution

Pengda Liu, John M. Kenney, John W. Stiller and Arno L. Greenleaf
Genetic Organization, Length Conservation, and Evolution of RNA Polymerase II Carboxyl-Terminal Domain

Huabin Zhao, Yingying Zhou, C. Miguel Pinto, Pierre Charles-Dominique, Jorge Galindo-González, Shuyi Zhang and Jianzhi Zhang
Evolution of the Sweet Taste Receptor Gene Tas1r2 in Bats

Barry Causier, Rosa Castillo, Yongbiao Xue, Zsuzsanna Schwarz-Sommer and Brendan Davies
Tracing the Evolution of the Floral Homeotic B- and C-Function Genes through Genome Synteny

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POLITYKA I NIE TYLKO , PRZEPISY KULINARNE , ULUBIONE KSIĄŻKI , DOWCIPY , GEOGRAFIA , ŚWIEBODZICE , FORUM O RODZAJU HOYA , PEUGEOT , TWOJE CENTRUM FINANSOWE , PiS , PLATFORMA OBYWATELSKA

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Annals of Botany - 105 (4), 2010

Contents:

ContentSnapshots

Plant Cuttings: news in botany

Nigel Chaffey
News in Botany: Nigel Chaffey presents a round-up of plant-based items from the world's media

Book Reviews

Michael F. Fay
Micropropagation of orchids, 2 volume set, 2nd edn

Alison M.R. Ferrie
Protocols for in vitro cultures and secondary metabolite analysis of aromatic and medicinal plants

Tomokazu Koshiba
Plant Hormones. Methods and Protocols, 2nd edn

David Lawlor
Photosynthesis in silico. Understanding complexity from molecules to ecosystems

Robert van Hulst
Statistics for terri?ed biologists

BOTANICAL BRIEFING

Beverley J. Glover and Heather M. Whitney
Structural colour and iridescence in plants: the poorly studied relations of pigment colour

REVIEW

Xiao Juan Yang and Patrick M. Finnegan
Regulation of phosphate starvation responses in higher plants

ORIGINAL ARTICLES

Simon Renny-Byfield, Malika Ainouche, Ilia J. Leitch, K. Yoong Lim, Steven C. Le Comber, and Andrew R. Leitch
Flow cytometry and GISH reveal mixed ploidy populations and Spartina nonaploids with genomes of S. alterniflora and S. maritima origin

Elena Albrecht, Miguel Escobar, and Roger T. Chetelat
Genetic diversity and population structure in the tomato-like nightshades Solanum lycopersicoides and S. sitiens

Alexander Vrijdaghs, Marc Reynders, Isabel Larridon, A. Muthama Muasya, Erik Smets, and Paul Goetghebeur
Spikelet structure and development in Cyperoideae (Cyperaceae): a monopodial general model based on ontogenetic evidence

J. G. Hodgson, M. Sharafi, A. Jalili, S. Díaz, G. Montserrat-Martí, C. Palmer, B. Cerabolini, S. Pierce, B. Hamzehee, Y. Asri, Z. Jamzad, P. Wilson, J. A. Raven, S. R. Band, S. Basconcelo, A. Bogard, G. Carter, M. Charles, P. Castro-Díez, J. H. C. Cornelissen, G. Funes, G. Jones, M. Khoshnevis, N. Pérez-Harguindeguy, M. C. Pérez-Rontomé, F. A. Shirvany, F. Vendramini, S. Yazdani, R. Abbas-Azimi, S. Boustani, M. Dehghan, J. Guerrero-Campo, A. Hynd, E. Kowsary, F. Kazemi-Saeed, B. Siavash, P. Villar-Salvador, R. Craigie, A. Naqinezhad, A. Romo-Díez, L. de Torres Espuny, and E. Simmons
Stomatal vs. genome size in angiosperms: the somatic tail wagging the genomic dog?

Hai-Gang Li, Jian-Bo Shen, Fu-Suo Zhang, and Hans Lambers
Localized application of soil organic matter shifts distribution of cluster roots of white lupin in the soil profile due to localized release of phosphorus

Benjamin R. Montgomery, Deanna M. Soper, and Lynda F. Delph
Asymmetrical conspecific seed-siring advantage between Silene latifolia and S. dioica

P. É. Lauri, J. J. Kelner, C. Trottier, and E. Costes
Insights into secondary growth in perennial plants: its unequal spatial and temporal dynamics in the apple (Malus domestica) is driven by architectural position and fruit load

Micha Ofir and Jaime Kigel
Ecotypic variation of summer dormancy relaxation associated with rainfall gradient in the geophytic grass Poa bulbosa

B. Moreira, J. Tormo, E. Estrelles, and J. G. Pausas
Disentangling the role of heat and smoke as germination cues in Mediterranean Basin flora

Akira S. Hirao
Kinship between parents reduces offspring fitness in a natural population of Rhododendron brachycarpum

SHORT COMMUNICATIONS

Nicole M. Hughes, William K. Smith, and Kevin S. Gould
Red (anthocyanic) leaf margins do not correspond to increased phenolic content in New Zealand Veronica spp.

Christian Parisod and Stéphane Joost
Divergent selection in trailing- versus leading-edge populations of Biscutella laevigata


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POLITYKA I NIE TYLKO , PRZEPISY KULINARNE , ULUBIONE KSIĄŻKI , DOWCIPY , GEOGRAFIA , ŚWIEBODZICE , FORUM O RODZAJU HOYA , ŚWIEBODZICE - FORUM

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