Journal of Biophysics and Structural Biology - 3 (1), 2011
Contents:
Natalia Dolzhanskaya, Wen Xie, George Merz and Robert B. Denman
EGFP-FMRP forms proto-stress granules: A poor surrogate for endogenous FMRP
S. B. Muley, V. Bastikar, S. Bothe, A. Meshram and N. Roy
Virulence prediction model (virprob) using amino acid and dipeptide composition for human pathogens
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Journal of Biophysics and Structural Biology - 3 (2), 2011
Contents:
P. Anil Kumar, P. Yadagiri Reddy, P. Suryanarayana and G. Bhanuprakash Reddy
Effect of the tannoid enriched fraction of Emblica officinalis on ?-crystallinchaperone activity under hyperglycemic conditions in lens organ culture
Sampath Natarajan and Rita Mathews
Modeling and proposed mechanism of two radical scavengers through docking to curtail the action of ribonucleotide reductase
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Journal of Biophysics and Structural Biology - 3 (3), 2011
Contents:
Wen Xie, George Merz and Robert B. Denman
pH uniquely modulates protein arginine methylation
Aintzane Cabo-Bilbao, Ariel E. Mechaly, Jon Agirre, Silvia Spinelli, Begona Sot, Arturo Muga and Diego M.A. Guérin
Crystal structure of the allosteric-defective chaperonin GroELE434K mutant
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Pokazywanie postów oznaczonych etykietą mutacja. Pokaż wszystkie posty
wtorek, 17 stycznia 2012
niedziela, 21 sierpnia 2011
Acta Scientiarum Polonorum Hortorum Cultus (Ogrodnictwo) - 10 (2), 2011
Contents:
Wpływ zróżnicowanego nawożenia azotem na wzrost, plonowanie i wielkość owoców odmiany Jonagored
Dariusz Wrona
Patogeniczność Drechslera avenae dla liści wybranych genotypów owsa i jego zdolność do produkcji związków antrachinonowych
Małgorzata Cegiełko, Irena Kiecana, Piotr Kachlicki, Wojciech Wakuliński
Zawartość niektórych pierwiastków w wybranych alternatywnych roślinach ogrodniczych uprawianych metodą ekologiczną na Litwie
Honorata Danilcenko, Elvyra Jariene, Marek Gajewski, Judita Cerniauskiene, Jurgita Kulaitiene, Barbara Sawicka, Paulina Aleknaviciene
Poprawa jakości nasion cynii poprzez osmokondycjonowanie i traktowanie ekstraktem z grejpfruta
Dorota Szopińska
Wzrost okulantów jabłoni odmian ‘Galaxy’ i ‘Rubin’ na klonach pochodzących z krzyżowania podkładek A.2 × B.9
Aleksander Stachowiak, Sławomir Świerczyński
Wpływ uszczykiwania oraz długości dnia na wzrost i kwitnienie ajanii spokojnej (Ajania pacifica (Nakai) Bremer et Humphries) w uprawie sterowanej
Małgorzata Zalewska, Małgorzata Antkowiak
Czerwce (Hemiptera, Sternorrhyncha, Coccoidea) występujące na roślinach ozdobnych w Polsce
Katarzyna Goliszek, Bożena Łagowska, Katarzyna Golan
Wartość odżywcza jadalnych kwiatów szczypiorku
Monika Grzeszczuk, Aneta Wesołowska, Dorota Jadczak, Barbara Jakubowska
Analiza ilościowa głównych cech wartości biologicznej oraz jakości owoców genotypów F1 śliwy domowej (Prunus domestica L.)
Tomo Milošević, Nebojša Milošević
Nowe odmiany chryzantem uzyskane na drodze mutagenezy in vitro z zastosowaniem różnych typów eksplantatów
Małgorzata Zalewska, Alicja Tymoszuk, Natalia Miler
Wzrost i owocowanie jabłoni ‘Elise’ na osiemnastu podkładkach wegetatywnych, prowadzonej w systemie „V”
Wojciech Kowalczyk, Dariusz Wrona
Wpływ dawki i rodzaju siarki na zawartość i pobranie mikroelementów przez bulwy ziemniaka (Solanum tubersosum L.)
Hanna Klikocka
Wpływ systemu uprawy roli i roślin międzyplonowych na zachwaszczenie skorzonery (Scorzonera hispanica L.)
Marzena Błażewicz-Woźniak, Mirosław Konopiński
Rośliny okrywowe a grzyby glebowe zagrażające uprawie salsefii (Tragopogon porrifolius var. sativus (Gaterau) Br.)
Elżbieta Patkowska, Mirosław Konopiński
Wpływ dolistnego nawożenia fasoli szparagowej solami żelaza i mocznikiem na przebieg niektórych procesów fizjologicznych w roślinach na tle jego pobierania i translokacji w liściach
Edward Borowski, Sławomir Michałek
Ocena aktywości enzymatycznej Pleurotus ostreatus w zależności od stadium rozwojowego grzybni
Aneta Sławińska, Janusz Kalbarczyk
Biometria odrostów nowo wyhodowanych klonów śliwy węgierki i śliwy wiśniowej w mateczniku podkładek
Gorica Paunović, Tomo Milošević, Ivan Glišić
Charakterystyka i występowanie Phoma spp. na ziołach z rodziny Lamiaceae
Beata Zimowska
Metoda wczesnej selekcji genotypów ogórka (Cucumis sativus L.) niewrażliwych na niską temperaturę na podstawie analizy eksploratywnej danych
Autor Hanna Bandurska, Jolanta Krzyszkowska, Krzysztof Moliński, Małgorzata Zielezińska
Plonowanie oraz skład chemiczny koszyczków nagietka lekarskiego (Calendula officinalis L. cv. Orange King) w zależności od nawożenia azotem
Beata Król
Laboratoryjna ocena wpływu azoksystrobiny i ekstraktu z grejpfruta na wzrost grzybów występujacych na cukinii
Agnieszka Jamiołkowska
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czwartek, 4 sierpnia 2011
The Plant Journal - 66 (4), 2011
Contents:
Genome-wide atlas of transcription during maize development
Sekhon, Rajandeep S.; Lin, Haining; Childs, Kevin L.; Hansey, Candice N.; Buell, C. Robin; de Leon, Natalia; Kaeppler, Shawn M.
Auxin stimulates DWARF4 expression and brassinosteroid biosynthesis in Arabidopsis
Chung, Yuhee; Maharjan, Puna M.; Lee, Oksun; Fujioka, Shozo; Jang, Suyoun; Kim, Bokyung; Takatsuto, Suguru; Tsujimoto, Masafumi; Kim, Hobang; Cho, Seoae; Park, Taesung; Cho, Hyunwoo; Hwang, Ildoo; Choe, Sunghwa
VASCULAR-RELATED NAC-DOMAIN?7 directly regulates the expression of a broad range of genes for xylem vessel formation
Yamaguchi, Masatoshi; Mitsuda, Nobutaka; Ohtani, Misato; Ohme-Takagi, Masaru; Kato, Ko; Demura, Taku
Role of aromatic aldehyde synthase in wounding/herbivory response and flower scent production in different Arabidopsis ecotypes
Gutensohn, Michael; Klempien, Antje; Kaminaga, Yasuhisa; Nagegowda, Dinesh A.; Negre-Zakharov, Florence; Huh, Jung-Hyun; Luo, Hongli; Weizbauer, Renate; Mengiste, Tesfaye; Tholl, Dorothea; Dudareva, Natalia
Ehd3, encoding a plant homeodomain finger-containing protein, is a critical promoter of rice flowering
Matsubara, Kazuki; Yamanouchi, Utako; Nonoue, Yasunori; Sugimoto, Kazuhiko; Wang, Zi-Xuan; Minobe, Yuzo; Yano, Masahiro
KMS1 and KMS2, two plant endoplasmic reticulum proteins involved in the early secretory pathway
Wang, Pengwei; Hummel, Eric; Osterrieder, Anne; Meyer, Andreas J.; Frigerio, Lorenzo; Sparkes, Imogen; Hawes, Chris
Dynamics of Arabidopsis SUN proteins during mitosis and their involvement in nuclear shaping
Oda, Yoshihisa; Fukuda, Hiroo
The pepper receptor-like cytoplasmic protein kinase CaPIK1 is involved in plant signaling of defense and cell-death responses
Kim, Dae Sung; Hwang, Byung Kook
Analysis of short-term changes in the Arabidopsis thaliana glycerolipidome in response to temperature and light
Burgos, Asdrubal; Szymanski, Jedrzej; Seiwert, Bettina; Degenkolbe, Thomas; Hannah, Matthew A.; Giavalisco, Patrick; Willmitzer, Lothar
The phosphomimetic mutation of an evolutionarily conserved serine residue affects the signaling properties of Rho of plants (ROPs)
Fodor-Dunai, Csilla; Fricke, Inka; Potocký, Martin; Dorjgotov, Dulguun; Domoki, Mónika; Jurca, Manuela E.; Ötvös, Krisztina; Žárský, Viktor; Berken, Antje; Fehér, Attila
Fatty acid elongase is required for shoot development in rice
Ito, Yukihiro; Kimura, Fumiko; Hirakata, Kazuma; Tsuda, Katsutoshi; Takasugi, Tomoaki; Eiguchi, Mitsugu; Nakagawa, Kiyotaka; Kurata, Nori
Over-expression of PHO1 in Arabidopsis leaves reveals its role in mediating phosphate efflux
Stefanovic, Aleksandra; Arpat, A. Bulak; Bligny, Richard; Gout, Elisabeth; Vidoudez, Charles; Bensimon, Michaël; Poirier, Yves
Improved protein-binding microarrays for the identification of DNA-binding specificities of transcription factors
Godoy, Marta; Franco-Zorrilla, José M.; Pérez-Pérez, Julián; Oliveros, Juan C.; Lorenzo, Óscar; Solano, Roberto
A recombineering-based gene tagging system for Arabidopsis
Zhou, Rongrong; Benavente, Larissa M.; Stepanova, Anna N.; Alonso, Jose M.
The Plant Journal - 65 (5), 2011
Contents:
Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm
Wakasa, Yuhya; Yasuda, Hiroshi; Oono, Youko; Kawakatsu, Taiji; Hirose, Sakiko; Takahashi, Hideyuki; Hayashi, Shimpei; Yang, Lijun; Takaiwa, Fumio
`happy on norflurazon' (hon) mutations implicate perturbance of plastid homeostasis with activating stress acclimatization and changing nuclear gene expression in norflurazon-treated seedlings
Saini, Geetanjali; Meskauskiene, Rasa; Pijacka, Wioletta; Roszak, Pawel; Sjögren, Lars L. E.; Clarke, Adrian K.; Straus, Marco; Apel, Klaus
Arabidopsis nucleoside hydrolases involved in intracellular and extracellular degradation of purines
Jung, Benjamin; Hoffmann, Christiane; Möhlmann, Torsten
Light exposure of Arabidopsis seedlings causes rapid de-stabilization as well as selective post-translational inactivation of the repressor of photomorphogenesis SPA2
Balcerowicz, Martin; Fittinghoff, Kirsten; Wirthmueller, Lennart; Maier, Alexander; Fackendahl, Petra; Fiene, Gabriele; Koncz, Csaba; Hoecker, Ute
Differential contributions of ribosomal protein genes to Arabidopsis thaliana leaf development
Horiguchi, Gorou; Mollá-Morales, Almudena; Pérez-Pérez, José Manuel; Kojima, Kouji; Robles, Pedro; Ponce, María Rosa; Micol, José Luis; Tsukaya, Hirokazu
A RESTORER OF FERTILITY-like PPR gene is required for 5'-end processing of the nad4 mRNA in mitochondria of Arabidopsis thaliana
Hölzle, Angela; Jonietz, Christian; Törjek, Ottó; Altmann, Thomas; Binder, Stefan; Forner, Joachim
Cross-genome map based dissection of a nitrogen use efficiency ortho-metaQTL in bread wheat unravels concerted cereal genome evolution
Quraishi, Umar Masood; Abrouk, Michael; Murat, Florent; Pont, Caroline; Foucrier, Séverine; Desmaizieres, Gregory; Confolent, Carole; Riviere, Nathalie; Charmet, Gilles; Paux, Etienne; Murigneux, Alain; Guerreiro, Laurent; Lafarge, Stéphane; Le Gouis, Jacques; Feuillet, Catherine; Salse, Jerome
The sucrose transporter family in Populus: the importance of a tonoplast PtaSUT4 to biomass and carbon partitioning
Payyavula, Raja S.; Tay, Kate H.C.; Tsai, Chung-Jui; Harding, Scott A.
Members of an R2R3-MYB transcription factor family in Petunia are developmentally and environmentally regulated to control complex floral and vegetative pigmentation patterning
Albert, Nick W.; Lewis, David H.; Zhang, Huaibi; Schwinn, Kathy E.; Jameson, Paula E.; Davies, Kevin M.
GhMYB25-like: a key factor in early cotton fibre development
Walford, Sally-Ann; Wu, Yingru; Llewellyn, Danny J.; Dennis, Elizabeth S.
Rice interspecies hybrids show precocious or delayed developmental transitions in the endosperm without change to the rate of syncytial nuclear division
Ishikawa, Ryo; Ohnishi, Takayuki; Kinoshita, Yuki; Eiguchi, Mitsugu; Kurata, Nori; Kinoshita, Tetsu
AtNUFIP, an essential protein for plant development, reveals the impact of snoRNA gene organisation on the assembly of snoRNPs and rRNA methylation in Arabidopsis thaliana
Rodor, Julie; Jobet, Edouard; Bizarro, Jonathan; Vignols, Florence; Carles, Cristel; Suzuki, Takamasa; Nakamura, Kenzo; Echeverría, Manuel
Small RNAs from MITE-derived stem-loop precursors regulate abscisic acid signaling and abiotic stress responses in rice
Yan, Yongsheng; Zhang, Yuman; Yang, Kun; Sun, Zongxiu; Fu, Yaping; Chen, Xiaoying; Fang, Rongxiang
BAC-recombineering for studying plant gene regulation: developmental control and cellular localization of SnRK1 kinase subunits
Bitrián, Marta; Roodbarkelari, Farshad; Horváth, Mihály; Koncz, Csaba
czwartek, 28 lipca 2011
South African Journal of Botany - 76 (4), 2010
Contents:
Editorial Board
Page IFC
Editorial
Chemical diversity and biological functions of plant volatiles
Andreas Jürgens, Alvaro M. Viljoen
Sites of synthesis, biochemistry and functional role of plant volatiles
M.E. Maffei
The pigment-scent connection: Do mutations in regulatory vs. structural anthocyanin genes differentially alter floral scent production in Ipomoea purpurea?
C.J. Majetic, M.D. Rausher, R.A. Raguso
Geraniol — A review of a commercially important fragrance material
W. Chen, A.M. Viljoen
Chemical composition of the wood and leaf oils from the “Clanwilliam Cedar” (Widdringtonia cedarbergensis J.A. Marsh): A critically endangered species
G.P.P. Kamatou, A.M. Viljoen, T. Özek, K.H.C. Başer
Validating the in vitro antimicrobial activity of Artemisia afra in polyherbal combinations to treat respiratory infections
S. Suliman, S.F. Van Vuuren, A.M. Viljoen
Pharmacological interactions of essential oil constituents on the in vitro growth of Plasmodium falciparum
R.L. Van Zyl, S.T. Seatlholo, A.M. Viljoen
The ethnobotany, leaf anatomy, essential oil variation and biological activity of Pteronia incana (Asteraceae)
I.M. Hulley, A.M. Viljoen, P.M. Tilney, S.F. Van Vuuren, G.P.P. Kamatou, B.-E. Van Wyk
Bioactivity of selected essential oils and some components on Listeria monocytogenes biofilms
C.M. Leonard, S. Virijevic, T. Regnier, S. Combrinck
In vitro and in vivo screening of essential oils for the control of wet bubble disease of Agaricus bisporus
T. Regnier, S. Combrinck
Volatile composition and antimicrobial activity of twenty commercial frankincense essential oil samples
S.F. Van Vuuren, G.P.P. Kamatou, A.M. Viljoen
Application of vibrational spectroscopy in the quality assessment of Buchu oil obtained from two commercially important Agathosma species (Rutaceae)
M. Sandasi, G.P.P. Kamatou, M. Baranska, A.M. Viljoen
Volatiles associated with different flower stages and leaves of Acacia cyclops and their potential role as host attractants for Dasineura dielsi (Diptera: Cecidomyiidae)
M.J. Kotze, A. Jürgens, S.D. Johnson, J.H. Hoffmann
Correlation of volatile profiles of twenty mango cultivars with their susceptibilities to mango gall fly infestation
W.A. Augustyn, B.M. Botha, S. Combrinck, W. Du Plooy
Scent chemistry and patterns of thermogenesis in male and female cones of the African cycad Encephalartos natalensis (Zamiaceae)
T.N. Suinyuy, J.S. Donaldson, S.D. Johnson
Pollinators, floral morphology and scent chemistry in the southern African orchid genus Schizochilus
T. Van der Niet, A. Jürgens, S.D. Johnson
Generalized pollination, floral scent chemistry, and a possible case of hybridization in the African orchid Disa fragrans
S.D. Johnson, N. Hobbhahn
Floral scent composition in early diverging taxa of Asclepiadoideae, and Secamonoideae (Apocynaceae)
A. Jürgens, S. Dötterl, S. Liede-Schumann, U. Meve
Scent chemistry and pollinator attraction in the deceptive trap flowers of Ceropegia dolichophylla
A. Heiduk, I. Brake, T. Tolasch, J. Frank, A. Jürgens, U. Meve, S. Dötterl
Floral scents of chafer-pollinated asclepiads and a potential hybrid
A. Shuttleworth, S.D. Johnson
Variation in scent emission among floral parts and inflorescence developmental stages in beetle-pollinated Protea species (Proteaceae)
S.-L. Steenhuisen, R.A. Raguso, A. Jürgens, S.D. Johnson
Echium and Pontechium specific floral cues for host–plant recognition by the oligolectic bee Hoplitis adunca
H. Burger, M. Ayasse, C.M. Häberlein, S. Schulz, S. Dötterl
Convergent evolution of carrion and faecal scent mimicry in fly-pollinated angiosperm flowers and a stinkhorn fungus
S.D. Johnson, A. Jürgens
Problem Plants and Alien Weeds of South Africa, 2010, 3rd edition, Clive Bromilow. Briza Publications, Arcadia 0007, Pretoria, Price: R295 Hard cover, 423 pages, ISBN: 978-1-920217-30-3, E-mail: , Website: www.briza.co.za.
J. Van Staden
Lynton Johnson, Landscape Design for the Home Owner , Briza Publications, Pretoria, South Africa (2009) Price: R215.00, Soft cover with 118 pages and more than 320 colour photographs, ISBN: 978-1-875093-77-9, E-mail: woodpamela@telkomsa.net, Website: www.briza.co.za.
Rogan Roth
K. Roberts, Editor, Handbook of Plant Science (2 Volume Set), Wiley, Chichester, England (2007) ISBN 978-0-470-05723-0 Price: €345.00, Hard Cover, 1648 pages, Website: www.wiley.com.
Marnie E. Light
Herbal Drugs: Ethnomedicine to Modern Medicine, K.G. Ramawat (Ed.), 2009, Springer-Verlag, Heidelberg, Germany, Price: €199.95, Hard Cover, 402 pages, ISBN: 978-3-540-79115-7, Website: www.springer.com.
Marnie E. Light
EndNote 1-2-3 Easy! Reference Management for the Professional, Second Edition, A. Agrawal, 2009, Springer, New York, USA, Price: €44.95, Soft Cover, 294 pages, ISBN: 978-0-387-95900-9, Website: www.springer.com.
Marnie E. Light
The Machinery of Life, Second Edition, David S. Goodsell, 2009, Copernicus Books, Springer Science + Business Media, New York, USA, Price: €25.00, Hard Cover, 167 pages, ISBN: 978-0-387-84924-9, Website: www.springer.com.
Marnie E. Light
Pooley's Trees of Eastern South Africa — A Complete Guide, Richard Boon, 2010, Flora & Fauna Publications Trust. Price: R295.00, PVC Cover, ISBN: 978-0-620-46019-4, E-mail: woodpamela@telkomsa.net, Website: www.briza.co.za.
Şerban Procheş
Russian Journal of Plant Physiology - 58 (3), 2011
Contents:
Research papres
Activities of Antioxidant Enzymes in Mitochondria of Growing and Dormant Sugar Beet Roots
A. G. Shugaev, D. A. Lashtabega, N. A. Shugaeva, and E. I. Vyskrebentseva
Nitrogen Application Improves Gas Exchange Characteristics and Chlorophyll Fluorescence in Maize Hybrids under Salinity Conditions
M. Akram, M. Y. Ashraf, M. Jamil, R. M. Iqbal, M. Nafees, and M. A. Khan
Ethylene Synthesis in Petunia Stigma Tissues Governs the Growth of Pollen Tubes in Progamic Phase of Fertilization
L. V. Kovaleva, G. V. Timofeeva, E. V. Zakharova, A. S. Voronkov, and V. Yu. Rakitin
Barrier Function of the Cell Wall during Uptake of Nickel Ions
N. R. Meychik, Yu. I. Nikolaeva, O. V. Komarynets, and I. P. Ermakov
Overexpression of Transcriptional Factor ORCA3 Increases the Accumulation of Catharanthine and Vindoline in Catharanthus roseus Hairy Roots
K. X. Tang, D. H. Liu, Y. L. Wang, L. J. Cui, W. W. Ren, and X. F. Sun
Patterns of ISSR and REMAP DNA Markers after Cryogenic Preservation of Spring Wheat Calluses by Dehydration Method
A. I. Solov’eva, Yu. I. Dolgikh, O. N. Vysotskaya, and A. S. Popov
A Splicing Site Mutation in BrpFLC1 and Repressed Expression of BrpFLC Genes are Associated with the Early Flowering of Purple Flowering Stalk
G. L. Hu, Z. L. Hu, Y. Li, F. Gu, Z. P. Zhao, and G. P. Chen
Early Ripening Events Caused by Bud Mutation in Beni Shogun Apple
Q. L. Dong, Z. Y. Yan, Z. Liu, and Y. X. Yao
Response of the Malate Dehydrogenase System of Maize Mesophyll and Bundle Sheath to Salt Stress
A. T. Eprintsev, O. S. Fedorina, and Yu. S. Bessmeltseva
Kinetin Improves Photosynthetic and Antioxidant Responses of Nigella sativa to Counteract Salt Stress
S. H. Shah
Polyamine Metabolism and Physiological Responses of Potamogeton crispus Leaves under Lead Stress
Y. Xu, G. X. Shi, C. X. Ding, and X. Y. Xu
Antioxidant Defense Mechanisms in Response to Cadmium Treatments in Two Safflower Cultivars
S. H. Namdjoyan, R. A. Khavari-Nejad, F. Bernard, T. Nejadsattari, and H. Shaker
Expression in Escherichia coli of the Gene Encoding Ascorbate Peroxidase from Brassica napus Enhances Salt Tolerance of Bacterial Cells
Z. B. Liu, Q. Wan, Y. F. Yue, H. W. Yang, J. M. Wang, X. F. Li, and Y. Yang
Effect of Nitrate Infusion into the Shoot Apoplast on Photosynthesis and Assimilate Transport in Symplastic and Apoplastic Plants
L. A. Khamidullina, F. A. Abdrakhimov, S. N. Batasheva, D. A. Frolov, and V. I. Chikov
Potential Structural and Biochemical Mechanisms of Compositae Wild Species Resistance to Alternaria tenuissima
G. Xu, Y. Liu, S. Chen, and F. Chen
Cloning and Expression of GhTM6, a Gene That Encodes a B-class MADS-Box Protein in Gossypium hirsutum
M. Wu, S. L. Fan, M. Z. Song, C. Y. Pang, J. H. Wei, J. Liu, J. W. Yu, J. F. Zhang, and S. X. Yu
Constitutive Expression of the ARGOS Gene Driven by Dahlia Mosaic Virus Promoter in Tobacco Plants
B. R. Kuluev, A. V. Knyazev, A. A. Iljassowa, and A. V. Chemeris
Fine Mapping of a Quantitative Trait Locus qHD3-1, Controlling the Heading Date, to a 29.5-kb DNA Fragment in Rice
W. Y. Wang, X. Liu, H. F. Ding, M. S. Jiang, G. X. Li, W. Liu, C. X. Zhu, and F. Y. Yao
Methods
Artificial Seed Preparation as the Efficient Method for Storage and Production of Healthy Cultured Roots of Medicinal Plants
M. Yu. Vdovitchenko and I. N. Kuzovkina
Brief communications
Physiological Behaviors of Acer mono under Drought and Low Light
Y. Yang, Q. Liu, and G. X. Wang
Effect of Water Deficit on Biomass Production and Accumulation of Secondary Metabolites in Roots of Glycyrrhiza uralensis
W. D. Li, J. L. Hou, W. Q. Wang, X. M. Tang, C. L. Liu, and D. Xing
wtorek, 12 kwietnia 2011
Molecular Biology and Evolution - 27 (12), 2010
Contents:
Letters
Huabin Zhao, Jian-Rong Yang, Huailiang Xu, and Jianzhi Zhang
Pseudogenization of the Umami Taste Receptor Gene Tas1r1 in the Giant Panda Coincided with its Dietary Switch to Bamboo
Simon Whelan and Daniel Money
The Prevalence of Multifurcations in Tree-space and Their Implications for Tree-search
Jan Ole Kriegs, Anja Zemann, Gennady Churakov, Andreas Matzke, Martina Ohme, Hans Zischler, Jürgen Brosius, Ute Kryger, and Jürgen Schmitz
Retroposon Insertions Provide Insights into Deep Lagomorph Evolution
Research Articles
Kyle M. Brown, Marna S. Costanzo, Wenxin Xu, Scott Roy, Elena R. Lozovsky and Daniel L. Hartl
Compensatory Mutations Restore Fitness during the Evolution of Dihydrofolate Reductase
Christophe Colleoni, Marc Linka, Philippe Deschamps, Michael G. Handford, Paul Dupree, Andreas P. M. Weber and Steven G. Ball
Phylogenetic and Biochemical Evidence Supports the Recruitment of an ADP-Glucose Translocator for the Export of Photosynthate during Plastid Endosymbiosis
Ryan J. Haasl and Bret A. Payseur
The Number of Alleles at a Microsatellite Defines the Allele Frequency Spectrum and Facilitates Fast Accurate Estimation of ?
Mart Krupovič, Simonetta Gribaldo, Dennis H. Bamford and Patrick Forterre
The Evolutionary History of Archaeal MCM Helicases: A Case Study of Vertical Evolution Combined with Hitchhiking of Mobile Genetic Elements
Nathaniel M. Evans, Mark T. Holder, Marcos S. Barbeitos, Beth Okamura and Paulyn Cartwright
The Phylogenetic Position of Myxozoa: Exploring Conflicting Signals in Phylogenomic and Ribosomal Data Sets
Matija Harcet, Maša Roller, Helena Ćetković, Drago Perina, Matthias Wiens, Werner E.G. Müller and Kristian Vlahoviček
Demosponge EST Sequencing Reveals a Complex Genetic Toolkit of the Simplest Metazoans
Enrico Negrisolo, Heiner Kuhl, Claudio Forcato, Nicola Vitulo, Richard Reinhardt, Tomaso Patarnello, and Luca Bargelloni
Different Phylogenomic Approaches to Resolve the Evolutionary Relationships among Model Fish Species
Takahito Shikano, Jetty Ramadevi and Juha Merilä
Identification of Local- and Habitat-Dependent Selection: Scanning Functionally Important Genes in Nine-Spined Sticklebacks (Pungitius pungitius)
Jennifer Ripplinger and Jack Sullivan
Assessment of Substitution Model Adequacy Using Frequentist and Bayesian Methods
Björn M. Hallström and Axel Janke
Mammalian Evolution May not Be Strictly Bifurcating
Shao-Lun Liu and Keith L. Adams
Dramatic Change in Function and Expression Pattern of a Gene Duplicated by Polyploidy Created a Paternal Effect Gene in the Brassicaceae
Silvan Oulion, Mélanie Debiais-Thibaud, Yves d'Aubenton-Carafa, Claude Thermes, Corinne Da Silva, Sylvie Bernard-Samain, Frédéric Gavory, Patrick Wincker, Sylvie Mazan and Didier Casane
Evolution of Hox Gene Clusters in Gnathostomes: Insights from a Survey of a Shark (Scyliorhinus canicula) Transcriptome
Kelly E. O'Quin, Christopher M. Hofmann, Hans A. Hofmann and Karen L. Carleton
Parallel Evolution of Opsin Gene Expression in African Cichlid Fishes
Bojian Zhong, Takahiro Yonezawa, Yang Zhong and Masami Hasegawa
The Position of Gnetales among Seed Plants: Overcoming Pitfalls of Chloroplast Phylogenomics
Arnaud Martin and Robert D. Reed
wingless and aristaless2 Define a Developmental Ground Plan for Moth and Butterfly Wing Pattern Evolution
Guiling Sun, Zefeng Yang, Arjun Ishwar and Jinling Huang
Algal Genes in the Closest Relatives of Animals
Editorial
Marcy K. Uyenoyama
Editor’s Report
John M. Archibald
Treasurer's Report for FY 2009
Standing Material
Associate Editors
SMBE Editors and Council
Subscription Page
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PLANT - FAMILY - FLOWER - GENERA - JOURNAL - ARTICOLO - PLANTS - PIANTE - BOTANIQUE - ROŚLINY - SINONIM - FAMIGLIA - BOTANY - NAUKA - SINONIMO - BOTANICA - WYCIECZKA - TRAVEL - SINÓNIMO - FRUIT - ARTICOLO - SYNONIEM - CZASOPISMO - SYNONYM - SYNONYME - SYSTEMATIC - SYSTEMATYKA - SZINONIMA - SYSTEMATYKA - RODZINA - ARTYKUŁ - ARTICLE - FLOWER - KWIATY - OWOC - SEEDS - NASIONA - CULTIVATION - USE - WATERING - PROPAGATION - PESTSM - DISEASES - FERTILIZATION - HOUSE - GARDEN - BOWL - KWITNIENIE - FLOWERBED - SOIL - POND - MARSH - SPECIES - HYBRIDS - VEGETABLE GARDEN - UPRAWA - ZASTOSOWANIE - PODLEWANIE - ROZMNAŻANIE - SZKODNIKI - CHOROBY - NAWOŻENIE - ROŚLINY DOMOWE - ROŚLINY BALKONOWE - ROŚLINY TARASOWE - OGRÓD - POJEMNIK - SUBSTRAT - PODŁOŻE - KERAMZYT - GLINA - TORF - DONICA - DONICZKA - ZIEMIA - RABATA - GLEBA - ROŚLINY WODNE - STAW - WODA - ROŚLINY BAGIENNE - OWOCE - WARZYWA - SPRZEDAŻ ROŚLIN - GATUNKI - MIESZAŃCE - CV - KULTYWARY
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POLITYKA I NIE TYLKO , PRZEPISY KULINARNE , ULUBIONE KSIĄŻKI , DOWCIPY , GEOGRAFIA , ŚWIEBODZICE , FORUM O RODZAJU HOYA , PEUGEOT , TWOJE CENTRUM FINANSOWE , PiS , PLATFORMA OBYWATELSKA
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środa, 22 grudnia 2010
The Plant Journal - 64 (3), 2010
Contents:
ORIGINAL ARTICLES
Multiple features that distinguish unilateral incongruity and self-incompatibility in the tomato clade (pages 367–378)
Paul A. Covey, Katsuhiko Kondo, Lilli Welch, Eric Frank, Shelley Sianta, Aruna Kumar, Reynaldo Nunez, Gloria Lopez-Casado, Esther Van Der Knaap, Jocelyn K. C. Rose, Bruce A. McClure and Patricia A. Bedinger
Tomato MAPKKK? is a positive regulator of cell-death signaling networks associated with plant immunity (pages 379–391)
Shiri Melech-Bonfil and Guido Sessa
Introns reduce transitivity proportionally to their length, suggesting that silencing spreads along the pre-mRNA (pages 392–401)
Leen Vermeersch, Nancy De Winne and Ann Depicker
Internal plastid-targeting signal found in a RubisCO small subunit protein of a chlorarachniophyte alga (pages 402–410)
Yoshihisa Hirakawa and Ken- ichiro Ishida
Transmembrane domain length is responsible for the ability of a plant reticulon to shape endoplasmic reticulum tubules in vivo (pages 411–418)
Nicholas Tolley, Imogen Sparkes, Christian P. Craddock, Peter J. Eastmond, John Runions, Chris Hawes and Lorenzo Frigerio
Endogenous overexpression of Populus MYB186 increases trichome density, improves insect pest resistance, and impacts plant growth (pages 419–432)
Jonathan M. Plett, Olivia Wilkins, Malcolm M. Campbell, Steven G. Ralph and Sharon Regan
Intragenic allele pyramiding combines different specificities of wheat Pm3 resistance alleles (pages 433–445)
Susanne Brunner, Severine Hurni, Philipp Streckeisen, Gabriele Mayr, Mario Albrecht, Nabila Yahiaoui and Beat Keller
The multiple origins of aluminium resistance in hexaploid wheat include Aegilops tauschii and more recent cis mutations to TaALMT1 (pages 446–455)
Peter R. Ryan, Harsh Raman, Sanjay Gupta, Takayuki Sasaki, Yoko Yamamoto and Emmanuel Delhaize
Glucosinolate-accumulating S-cells in Arabidopsis leaves and flower stalks undergo programmed cell death at early stages of differentiation (pages 456–469)
Olga A. Koroleva, Trevor M. Gibson, Rainer Cramer and Chris Stain
The PAM1 gene of petunia, required for intracellular accommodation and morphogenesis of arbuscular mycorrhizal fungi, encodes a homologue of VAPYRIN (pages 470–481)
Nadja Feddermann, Rajasekhara Reddy Duvvuru Muni, Tatyana Zeier, Jeroen Stuurman, Flavia Ercolin, Martine Schorderet and Didier Reinhardt
The fasciclin-like arabinogalactan protein gene, FLA3, is involved in microspore development of Arabidopsis (pages 482–497)
Jun Li, Miao Yu, Ling-Ling Geng and Jie Zhao
Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication (pages 498–510)
Nagao Hayashi, Haruhiko Inoue, Takahiro Kato, Taketo Funao, Masaki Shirota, Takehiko Shimizu, Hiroyuki Kanamori, Hiroko Yamane, Yuriko Hayano-Saito, Takashi Matsumoto, Masahiro Yano and Hiroshi Takatsuji
Elongator subunit 2 is an accelerator of immune responses in Arabidopsis thaliana (pages 511–523)
Christopher T. DeFraia, Xudong Zhang and Zhonglin Mou
The DOF transcription factor Dof5.1 influences leaf axial patterning by promoting Revoluta transcription in Arabidopsis (pages 524–535)
Hyung-Sae Kim, Sung Jin Kim, Nazia Abbasi, Ray A. Bressan, Dae-Jin Yun, Sang-Dong Yoo, Suk-Yun Kwon and Sang-Bong Choi
Pumpkin eIF5A isoforms interact with components of the translational machinery in the cucurbit sieve tube system (pages 536–550)
Yi Ma, Eriko Miura, Byung-Kook Ham, Hao-Wen Cheng, Young-Jin Lee and William J. Lucas
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family, flower, genera, plants, sinonim, sinonimo, sinónimo, sinônimo, synoniem, synonym, synonyme, systematic, szinonima, systematyka, roślina, rodzina, piante,
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POLITYKA I NIE TYLKO , PRZEPISY KULINARNE , ULUBIONE KSIĄŻKI , DOWCIPY , GEOGRAFIA , ŚWIEBODZICE , FORUM O RODZAJU HOYA
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wtorek, 21 grudnia 2010
The Plant Journal - 63 (6), 2010
Contents:
ORIGINAL ARTICLES
CLAVATA2 forms a distinct CLE-binding receptor complex regulating Arabidopsis stem cell specification (pages 889–900)
Yongfeng Guo, Linqu Han, Matthew Hymes, Robert Denver and Steven E. Clark
A missense mutation in the vacuolar protein GOLD36 causes organizational defects in the ER and aberrant protein trafficking in the plant secretory pathway (pages 901–913)
Lucia Marti, Giovanni Stefano, Kentaro Tamura, Chris Hawes, Luciana Renna, Michael A. Held and Federica Brandizzi
GORDITA (AGL63) is a young paralog of the Arabidopsis thaliana Bsister MADS box gene ABS (TT16) that has undergone neofunctionalization (pages 914–924)
Robert Erdmann, Lydia Gramzow, Rainer Melzer, Günter Theißen and Annette Becker
Two duplicate CYP704B1-homologous genes BnMs1 and BnMs2 are required for pollen exine formation and tapetal development in Brassica napus (pages 925–938)
Bin Yi, Fangqin Zeng, Shaolin Lei, Yunin Chen, Xueqin Yao, Yun Zhu, Jing Wen, Jinxiong Shen, Chaozhi Ma, Jinxing Tu and Tingdong Fu
The male sterile 8 mutation of maize disrupts the temporal progression of the transcriptome and results in the mis-regulation of metabolic functions (pages 939–951)
Dongxue Wang, Juan A. Oses-Prieto, Kathy H. Li, John F. Fernandes, Alma L. Burlingame and Virginia Walbot
Parallel structural evolution of auxin response factors in the angiosperms (pages 952–959)
Cédric Finet, Chloé Fourquin, Marion Vinauger, Annick Berne-Dedieu, Pierre Chambrier, Sandrine Paindavoine and Charles P. Scutt
FORKED1 encodes a PH domain protein that is required for PIN1 localization in developing leaf veins (pages 960–973)
Hongwei Hou, Jessica Erickson, James Meservy and Elizabeth A. Schultz
Arabidopsis BLADE-ON-PETIOLE1 and 2 promote floral meristem fate and determinacy in a previously undefined pathway targeting APETALA1 and AGAMOUS-LIKE24 (pages 974–989)
Mingli Xu, Tieqiang Hu, Sarah M. McKim, Jhadeswar Murmu, George W. Haughn and Shelley R. Hepworth
Rice structural variation: a comparative analysis of structural variation between rice and three of its closest relatives in the genus Oryza (pages 990–1003)
Bonnie L. Hurwitz, Dave Kudrna, Yeisoo Yu, Aswathy Sebastian, Andrea Zuccolo, Scott A. Jackson, Doreen Ware, Rod A. Wing and Lincoln Stein
Non-invasive quantification of endogenous root auxin transport using an integrated flux microsensor technique (pages 1004–1016)
Eric S. McLamore, Alfred Diggs, Percy Calvo Marzal, Jin Shi, Joshua J. Blakeslee, Wendy A. Peer, Angus S. Murphy and D. Marshall Porterfield
MAPK phosphatase MKP2 mediates disease responses in Arabidopsis and functionally interacts with MPK3 and MPK6 (pages 1017–1030)
Victoria Lumbreras, Belmiro Vilela, Sami Irar, Montserrat Solé, Montserrat Capellades, Marc Valls, Maria Coca and Montserrat Pages
Malonylation is a key reaction in the metabolism of xenobiotic phenolic glucosides in Arabidopsis and tobacco (pages 1031–1041)
Goro Taguchi, Takahisa Ubukata, Hatsumi Nozue, Yuki Kobayashi, Maki Takahi, Hirobumi Yamamoto and Nobuaki Hayashida
Spermidine oxidase-derived H2O2 regulates pollen plasma membrane hyperpolarization-activated Ca2+-permeable channels and pollen tube growth (pages 1042–1053)
Juyou Wu, Zhonglin Shang, Jun Wu, Xueting Jiang, Panagiotis N. Moschou, Wending Sun, Kalliopi A. Roubelakis-Angelakis and Shaoling Zhang
AtALMT12 represents an R-type anion channel required for stomatal movement in Arabidopsis guard cells (pages 1054–1062)
Stefan Meyer, Patrick Mumm, Dennis Imes, Anne Endler, Barbara Weder, Khaled A.S. Al-Rasheid, Dietmar Geiger, Irene Marten, Enrico Martinoia and Rainer Hedrich
A global analysis of QTLs for expression variations in rice shoots at the early seedling stage (pages 1063–1074)
Jia Wang, Huihui Yu, Weibo Xie, Yongzhong Xing, Sibin Yu, Caiguo Xu, Xianghua Li, Jinghua Xiao and Qifa Zhang
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plant - family - flower - genera - journal - articolo - plants - piante - botanique - rośliny - sinonim - famiglia - botany - nauka - sinonimo - botanica - wycieczka - travel - sinónimo - fruit - sinônimo - articolo - synoniem - czasopismo - synonym - synonyme - systematic - systematyka - szinonima - systematyka - rodzina - artykuł - article - flower - kwiaty - owoc - seeds - nasiona
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POLITYKA I NIE TYLKO , PRZEPISY KULINARNE , ULUBIONE KSIĄŻKI , DOWCIPY , GEOGRAFIA , ŚWIEBODZICE , FORUM O RODZAJU HOYA
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czwartek, 9 grudnia 2010
Plant Biotechnology Journal - 6 (5), 2008
Contents:
Molecular Farming – Plant Biologicals, EuroSciCon (http://www.euroscicon.com) (pages 425–426)
Belinda Clarke
Human papillomavirus L1 protein expressed in tobacco chloroplasts self-assembles into virus-like particles that are highly immunogenic (pages 427–441)
Alicia Fernández-San Millán, Susana M. Ortigosa, Sandra Hervás-Stubbs, Patricia Corral-Martínez, José M. Seguí-Simarro, Julien Gaétan, Pierre Coursaget and Jon Veramendi
Transgenic tomato plants alter quorum sensing in plant growth-promoting rhizobacteria (pages 442–452)
Jorge Barriuso, Beatriz Ramos Solano, Rupert G. Fray, Miguel Cámara, Anton Hartmann and F. Javier Gutiérrez Manero
Overriding the co-limiting import of carbon and energy into tuber amyloplasts increases the starch content and yield of transgenic potato plants (pages 453–464)
Lizhi Zhang, Rainer E. Häusler, Christian Greiten, Mohammad-Reza Hajirezaei, Ilka Haferkamp, H. Ekkehard Neuhaus, Ulf-Ingo Flügge and Frank Ludewig
Spatial and temporal expression of endosperm transfer cell-specific promoters in transgenic rice and barley (pages 465–476)
Ming Li, Rohan Singh, Natalia Bazanova, Andrew S. Milligan, Neil Shirley, Peter Langridge and Sergiy Lopato
TILLMore, a resource for the discovery of chemically induced mutants in barley (pages 477–485)
Valentina Talame, Riccardo Bovina, Maria Corinna Sanguineti, Roberto Tuberosa, Udda Lundqvist and Silvio Salvi
Soybean WRKY-type transcription factor genes, GmWRKY13, GmWRKY21, and GmWRKY54, confer differential tolerance to abiotic stresses in transgenic Arabidopsis plants (pages 486–503)
Qi-Yun Zhou, Ai-Guo Tian, Hong-Feng Zou, Zong-Ming Xie, Gang Lei, Jian Huang, Chun-Mei Wang, Hui-Wen Wang, Jin-Song Zhang and Shou-Yi Chen
A novel platform for biologically active recombinant human interleukin-13 production (pages 504–515)
David J. Wang, Martin Brandsma, Ziqin Yin, Aiming Wang, Anthony M. Jevnikar and Shengwu Ma
High-density seedling expression system for the production of bioactive human cardiotrophin-1, a potential therapeutic cytokine, in transgenic tobacco chloroplasts (pages 516–527)
Imma Farran, Francisco Río-Manterola, María Íniguez, Sonia Gárate, Jesús Prieto and Angel M. Mingo-Castel
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plant | roślina | bimore | usine | rostlina | plante | tehase | planta | augalas | augu | Anlage | Anlegg | rastlina | rastlin | növényfajta | piante
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POLITYKA I NIE TYLKO , PRZEPISY KULINARNE , ULUBIONE KSIĄŻKI , DOWCIPY , GEOGRAFIA , ŚWIEBODZICE , FORUM O RODZAJU HOYA
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poniedziałek, 13 września 2010
Molecular Biology and Evolution - 27 (5), V 2010
(Volume 27, Issue 5, May 2010)
SPIS TREŚCI:
LETTER
Withering Away — 25,000 Years of Genetic Decline Preceded Cave Bear Extinction
Mathias Stiller, Gennady Baryshnikov, Hervé Bocherens, Aurora Grandal d'Anglade, Brigitte Hilpert, Susanne C. Münzel, Ron Pinhasi, Gernot Rabeder, Wilfried Rosendahl, Erik Trinkaus, Michael Hofreiter, Michael Knapp
RESEARCH ARTICLES
Expansion of the miRNA Pathway in the Hemipteran Insect Acyrthosiphon pisum
Stéphanie Jaubert-Possamai, Claude Rispe, Sylvie Tanguy, Karl Gordon, Thomas Walsh, Owain Edwards, Denis Tagu
Evaluating the Relationship between Evolutionary Divergence and Phylogenetic Accuracy in AFLP Data Sets
María Jesús García-Pereira, Armando Caballero, and Humberto Quesada
Demographic histories of four spruce ( Picea ) species of the Qinghai-Tibetan Plateau and neighboring areas inferred from multiple nuclear loci
Yuan Li, Michael Stocks, Sofia Hemmilä, Thomas Källman, Hongtao Zhu, Yongfeng Zhou, Jun Chen, Jianquan Liu, Martin Lascoux
Comparative Testing of DNA Segmentation Algorithms Using Benchmark Simulations
Eran Elhaik, Dan Graur, and Kre š imir Josi ´c
Positions under Positive Selection — Key for Selectivity and Potency of Scorpion a -Toxins
Hagar Weinberger, Yehu Moran, Dalia Gordon, Michael Turkov, Roy Kahn, and Michael Gurevitz
The Increase in the Number of Subunits in Eukaryotic RNA Polymerase III Relative to RNA Polymerase II Is due to the Permanent Recruitment of General Transcription Factors
Robert Carter and Guy Drouin
Using Data-Display Networks for Exploratory Data Analysis in Phylogenetic Studies
David A. Morrison
Evolutionary Expansion and Specialization of the PDZ Domains
O. Sakarya, C. Conaco, S.A. Solla, T.H. Oakley, K.S. Kosik
Permuted tRNA Genes in the Nuclear and Nucleomorph Genomes of Photosynthetic Eukaryotes
Shinichiro Maruyama, Junichi Sugahara, Akio Kanai, and Hisayoshi Nozaki
Timing of Replication Is a Determinant of Neutral Substitution Rates but Does Not Explain Slow Y Chromosome Evolution in Rodents
Catherine J. Pink and Laurence D. Hurst
Evolution of Caenorhabditis Mitochondrial Genome Pseudogenes and Caenorhabditis briggsae Natural Isolates
Michael J. Raboin, Ashley F. Timko, Dana K. Howe, Marie-Anne Félix, and Dee R. Denver
Functional Diversity of Signaling Pathways through G Protein – Coupled Receptor Heterodimerization with a Species-Specific Orphan Receptor Subtype
Tsubasa Sakai, Masato Aoyama, Takehiro Kusakabe, Motoyuki Tsuda, and Honoo Satake
Divergence of the Mitochondrial Genome Structure in the Apicomplexan Parasites, Babesia and Theileria
Kenji Hikosaka, Yoh-ichi Watanabe, Naotoshi Tsuji, Kiyoshi Kita, Hiroe Kishine, Nobuko Arisue, Nirianne Marie Q. Palacpac, Shin-ichiro Kawazu, Hiromi Sawai, Toshihiro Horii, Ikuo Igarashi, Kazuyuki Tanabe
Field, Genetic, and Modeling Approaches Show Strong Positive Selection Acting upon an Insecticide Resistance Mutation in Anopheles gambiae s.s.
Amy Lynd, David Weetman, Susana Barbosa, Alexander Egyir Yawson, Sara Mitchell, Joao Pinto, Ian Hastings, Martin J. Donnelly
Lineage-Specific Patterns of Functional Diversification in the a - and b -Globin Gene Families of Tetrapod Vertebrates
Federico G. Hoffmann, Jay F. Storz, Thomas A. Gorr, and Juan C. Opazo
Homoplasy and Distribution of AFLP Fragments: An Analysis In Silico of the Genome of Different Species
Armando Caballero and Humberto Quesada
A Novel Method to Detect Proteins Evolving at Correlated Rates: Identifying New Functional Relationships between Coevolving Proteins
Nathaniel L. Clark and Charles F. Aquadro
A Continuous-State Coalescent and the Impact of Weak Selection on the Structure of Gene Genealogies
Brendan D. O’Fallon, Jon Seger, and Frederick R. Adler
A Generation Time Effect on the Rate of Molecular Evolution in Invertebrates
Jessica A. Thomas, John J. Welch, Robert Lanfear, and Lindell Bromham
Functionally Compensating, Coevolving Positions Are Neither Homoplasic Nor Conserved in Clades
Gregory B. Gloor, Gaurav Tyagi, Dana M. Abrassart, Andrew J. Kingston, Andrew D. Fernandes, Stanley D. Dunn, Christopher J. Brandl
Degeneration of Olfactory Receptor Gene Repertories in Primates: No Direct Link to Full Trichromatic Vision
Atsushi Matsui, Yasuhiro Go, and Yoshihito Niimura
MIKC* MADS-Box Proteins: Conserved Regulators of the Gametophytic Generation of Land Plants
Oliver Zobell, Wolfram Faigl, Heinz Saedler, and Thomas Münster
Epitope Discovery with Phylogenetic Hidden Markov Models
Miguel Lacerda, Konrad Scheffler, and Cathal Seoighe
______________________
SPIS TREŚCI:
LETTER
Withering Away — 25,000 Years of Genetic Decline Preceded Cave Bear Extinction
Mathias Stiller, Gennady Baryshnikov, Hervé Bocherens, Aurora Grandal d'Anglade, Brigitte Hilpert, Susanne C. Münzel, Ron Pinhasi, Gernot Rabeder, Wilfried Rosendahl, Erik Trinkaus, Michael Hofreiter, Michael Knapp
RESEARCH ARTICLES
Expansion of the miRNA Pathway in the Hemipteran Insect Acyrthosiphon pisum
Stéphanie Jaubert-Possamai, Claude Rispe, Sylvie Tanguy, Karl Gordon, Thomas Walsh, Owain Edwards, Denis Tagu
Evaluating the Relationship between Evolutionary Divergence and Phylogenetic Accuracy in AFLP Data Sets
María Jesús García-Pereira, Armando Caballero, and Humberto Quesada
Demographic histories of four spruce ( Picea ) species of the Qinghai-Tibetan Plateau and neighboring areas inferred from multiple nuclear loci
Yuan Li, Michael Stocks, Sofia Hemmilä, Thomas Källman, Hongtao Zhu, Yongfeng Zhou, Jun Chen, Jianquan Liu, Martin Lascoux
Comparative Testing of DNA Segmentation Algorithms Using Benchmark Simulations
Eran Elhaik, Dan Graur, and Kre š imir Josi ´c
Positions under Positive Selection — Key for Selectivity and Potency of Scorpion a -Toxins
Hagar Weinberger, Yehu Moran, Dalia Gordon, Michael Turkov, Roy Kahn, and Michael Gurevitz
The Increase in the Number of Subunits in Eukaryotic RNA Polymerase III Relative to RNA Polymerase II Is due to the Permanent Recruitment of General Transcription Factors
Robert Carter and Guy Drouin
Using Data-Display Networks for Exploratory Data Analysis in Phylogenetic Studies
David A. Morrison
Evolutionary Expansion and Specialization of the PDZ Domains
O. Sakarya, C. Conaco, S.A. Solla, T.H. Oakley, K.S. Kosik
Permuted tRNA Genes in the Nuclear and Nucleomorph Genomes of Photosynthetic Eukaryotes
Shinichiro Maruyama, Junichi Sugahara, Akio Kanai, and Hisayoshi Nozaki
Timing of Replication Is a Determinant of Neutral Substitution Rates but Does Not Explain Slow Y Chromosome Evolution in Rodents
Catherine J. Pink and Laurence D. Hurst
Evolution of Caenorhabditis Mitochondrial Genome Pseudogenes and Caenorhabditis briggsae Natural Isolates
Michael J. Raboin, Ashley F. Timko, Dana K. Howe, Marie-Anne Félix, and Dee R. Denver
Functional Diversity of Signaling Pathways through G Protein – Coupled Receptor Heterodimerization with a Species-Specific Orphan Receptor Subtype
Tsubasa Sakai, Masato Aoyama, Takehiro Kusakabe, Motoyuki Tsuda, and Honoo Satake
Divergence of the Mitochondrial Genome Structure in the Apicomplexan Parasites, Babesia and Theileria
Kenji Hikosaka, Yoh-ichi Watanabe, Naotoshi Tsuji, Kiyoshi Kita, Hiroe Kishine, Nobuko Arisue, Nirianne Marie Q. Palacpac, Shin-ichiro Kawazu, Hiromi Sawai, Toshihiro Horii, Ikuo Igarashi, Kazuyuki Tanabe
Field, Genetic, and Modeling Approaches Show Strong Positive Selection Acting upon an Insecticide Resistance Mutation in Anopheles gambiae s.s.
Amy Lynd, David Weetman, Susana Barbosa, Alexander Egyir Yawson, Sara Mitchell, Joao Pinto, Ian Hastings, Martin J. Donnelly
Lineage-Specific Patterns of Functional Diversification in the a - and b -Globin Gene Families of Tetrapod Vertebrates
Federico G. Hoffmann, Jay F. Storz, Thomas A. Gorr, and Juan C. Opazo
Homoplasy and Distribution of AFLP Fragments: An Analysis In Silico of the Genome of Different Species
Armando Caballero and Humberto Quesada
A Novel Method to Detect Proteins Evolving at Correlated Rates: Identifying New Functional Relationships between Coevolving Proteins
Nathaniel L. Clark and Charles F. Aquadro
A Continuous-State Coalescent and the Impact of Weak Selection on the Structure of Gene Genealogies
Brendan D. O’Fallon, Jon Seger, and Frederick R. Adler
A Generation Time Effect on the Rate of Molecular Evolution in Invertebrates
Jessica A. Thomas, John J. Welch, Robert Lanfear, and Lindell Bromham
Functionally Compensating, Coevolving Positions Are Neither Homoplasic Nor Conserved in Clades
Gregory B. Gloor, Gaurav Tyagi, Dana M. Abrassart, Andrew J. Kingston, Andrew D. Fernandes, Stanley D. Dunn, Christopher J. Brandl
Degeneration of Olfactory Receptor Gene Repertories in Primates: No Direct Link to Full Trichromatic Vision
Atsushi Matsui, Yasuhiro Go, and Yoshihito Niimura
MIKC* MADS-Box Proteins: Conserved Regulators of the Gametophytic Generation of Land Plants
Oliver Zobell, Wolfram Faigl, Heinz Saedler, and Thomas Münster
Epitope Discovery with Phylogenetic Hidden Markov Models
Miguel Lacerda, Konrad Scheffler, and Cathal Seoighe
______________________
sobota, 17 lipca 2010
The Plant Journal (Volume 62, number 5 & 6)
Volume 62, Number 5, June 2010
Spis treści:
Functional analysis of the anaphase promoting complex activator CCS52A highlights the crucial role of endo-reduplication for fruit growth in tomato
Transcriptome-wide identification of microRNA targets in rice
H2O2 in plant peroxisomes: an in vivo analysis uncovers a Ca2+-dependent scavenging system
Identification and genetic analysis of the APOSPORY locus in Hypericum perforatum L.
Arabidopsis has a cytosolic fumarase required for the massive allocation of photosynthate into fumaric acid and for rapid plant growth on high nitrogen
Histone hyperacetylation affects meiotic recombination and chromosome segregation in Arabidopsis
Control of lateral organ development and flowering time by the Arabidopsis thaliana MADS-box Gene AGAMOUS-LIKE6
The SERK1 receptor-like kinase regulates organ separation in Arabidopsis flowers
Tobacco mutants with reduced microtubule dynamics are less susceptible to TMV
Disease resistance of Arabidopsis to Phytophthora brassicae is established by the sequential action of indole glucosinolates and camalexin
A member of the highly conserved FWL (tomato FW2.2-like) gene family is essential for soybean nodule organogenesis
RLF, a cytochrome?b5-like heme/steroid binding domain protein, controls lateral root formation independently of ARF7/19-mediated auxin signaling in Arabidopsis thaliana
Insect eggs suppress plant defence against chewing herbivores
The composition and structure of photosystem I-associated antenna from Cyanidioschyzon merolae
Repeat subtraction-mediated sequence capture from a complex genome
Volume 62, Number 6, June 2010
Spis treści:
A key enzyme for flavin synthesis is required for nitric oxide and reactive oxygen species production in disease resistance
A role for ABIL3 in plant cell morphogenesis
A peroxisomal ABC transporter promotes seed germination by inducing pectin degradation under the control of ABI5
Visualizing the mobility and distribution of chlorophyll proteins in higher plant thylakoid membranes: effects of photoinhibition and protein phosphorylation
Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis
Inhibition of 5'-methylthioadenosine metabolism in the Yang cycle alters polyamine levels, and impairs seedling growth and reproduction in Arabidopsis
Acyl-CoA-binding protein 2 binds lysophospholipase 2 and lysoPC to promote tolerance to cadmium-induced oxidative stress in transgenic Arabidopsis
Mutations of the ER to plastid lipid transporters TGD1, 2, 3 and 4 and the ER oleate desaturase FAD2 suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2
A single-repeat MYB transcription factor, GmMYB176, regulates CHS8 gene expression and affects isoflavonoid biosynthesis in soybean
The transcription factor RSG regulates negative feedback of NtGA20ox1 encoding GA 20-oxidase
MicroRNA395 mediates regulation of sulfate accumulation and allocation in Arabidopsis thaliana
Metabolic profiling reveals local and systemic responses of host plants to nematode parasitism
Stomatal action directly feeds back on leaf turgor: new insights into the regulation of the plant water status from non-invasive pressure probe measurements
The grape microvine - a model system for rapid forward and reverse genetics of grapevines
Spis treści:
Functional analysis of the anaphase promoting complex activator CCS52A highlights the crucial role of endo-reduplication for fruit growth in tomato
Transcriptome-wide identification of microRNA targets in rice
H2O2 in plant peroxisomes: an in vivo analysis uncovers a Ca2+-dependent scavenging system
Identification and genetic analysis of the APOSPORY locus in Hypericum perforatum L.
Arabidopsis has a cytosolic fumarase required for the massive allocation of photosynthate into fumaric acid and for rapid plant growth on high nitrogen
Histone hyperacetylation affects meiotic recombination and chromosome segregation in Arabidopsis
Control of lateral organ development and flowering time by the Arabidopsis thaliana MADS-box Gene AGAMOUS-LIKE6
The SERK1 receptor-like kinase regulates organ separation in Arabidopsis flowers
Tobacco mutants with reduced microtubule dynamics are less susceptible to TMV
Disease resistance of Arabidopsis to Phytophthora brassicae is established by the sequential action of indole glucosinolates and camalexin
A member of the highly conserved FWL (tomato FW2.2-like) gene family is essential for soybean nodule organogenesis
RLF, a cytochrome?b5-like heme/steroid binding domain protein, controls lateral root formation independently of ARF7/19-mediated auxin signaling in Arabidopsis thaliana
Insect eggs suppress plant defence against chewing herbivores
The composition and structure of photosystem I-associated antenna from Cyanidioschyzon merolae
Repeat subtraction-mediated sequence capture from a complex genome
Volume 62, Number 6, June 2010
Spis treści:
A key enzyme for flavin synthesis is required for nitric oxide and reactive oxygen species production in disease resistance
A role for ABIL3 in plant cell morphogenesis
A peroxisomal ABC transporter promotes seed germination by inducing pectin degradation under the control of ABI5
Visualizing the mobility and distribution of chlorophyll proteins in higher plant thylakoid membranes: effects of photoinhibition and protein phosphorylation
Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis
Inhibition of 5'-methylthioadenosine metabolism in the Yang cycle alters polyamine levels, and impairs seedling growth and reproduction in Arabidopsis
Acyl-CoA-binding protein 2 binds lysophospholipase 2 and lysoPC to promote tolerance to cadmium-induced oxidative stress in transgenic Arabidopsis
Mutations of the ER to plastid lipid transporters TGD1, 2, 3 and 4 and the ER oleate desaturase FAD2 suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2
A single-repeat MYB transcription factor, GmMYB176, regulates CHS8 gene expression and affects isoflavonoid biosynthesis in soybean
The transcription factor RSG regulates negative feedback of NtGA20ox1 encoding GA 20-oxidase
MicroRNA395 mediates regulation of sulfate accumulation and allocation in Arabidopsis thaliana
Metabolic profiling reveals local and systemic responses of host plants to nematode parasitism
Stomatal action directly feeds back on leaf turgor: new insights into the regulation of the plant water status from non-invasive pressure probe measurements
The grape microvine - a model system for rapid forward and reverse genetics of grapevines
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