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niedziela, 24 lutego 2013

Genome Biology and Evolution - 4 (12), 2012






Contents:

Research Articles

        Kyanne R. Reidenbach, Daniel E. Neafsey, Carlo Costantini, N’Fale Sagnon, Frédéric Simard, Gregory J. Ragland, Scott P. Egan, Jeffrey L. Feder, Marc A. T. Muskavitch, and Nora J. Besansky
    Patterns of Genomic Differentiation between Ecologically Differentiated M and S Forms of Anopheles gambiae in West and Central Africa
  
        Onuralp Soylemez and Fyodor A. Kondrashov
    Estimating the Rate of Irreversibility in Protein Evolution
  
        David Williams, J. Peter Gogarten, and R. Thane Papke
    Quantifying Homologous Replacement of Loci between Haloarchaeal Species
   
        Yu-Ping Poh, Chau-Ti Ting, Hua-Wen Fu, Charles H. Langley, and David J. Begun
    Population Genomic Analysis of Base Composition Evolution in Drosophila melanogaster
   
        Jarrett D. Morrow and Vaughn S. Cooper
    Evolutionary Effects of Translocations in Bacterial Genomes
  
        David Alvarez-Ponce and Mario A. Fares
    Evolutionary Rate and Duplicability in the Arabidopsis thaliana Protein–Protein Interaction Network
   
        Anne-Catrin Uhlemann, Adam D. Kennedy, Craig Martens, Stephen F. Porcella, Frank R. DeLeo, and Franklin D. Lowy
    Toward an Understanding of the Evolution of Staphylococcus aureus Strain USA300 during Colonization in Community Households
  
        Sabrina Simon, Apurva Narechania, Rob DeSalle, and Heike Hadrys
    Insect Phylogenomics: Exploring the Source of Incongruence Using New Transcriptomic Data
    
        José R. López Arriaza, and Rachel Lockridge Mueller
    Slow DNA Loss in the Gigantic Genomes of Salamanders
   
        Danielle Venton
    Highlight—Making It Big: Salamanders Keep DNA Near and Dear
 
        Christopher Grosche, Helena T. Funk, Uwe G. Maier, and Stefan Zauner
    The Chloroplast Genome of Pellia endiviifolia: Gene Content, RNA-Editing Pattern, and the Origin of Chloroplast Editing
   
        Aitor Gonzaga, Ana-Belen Martin-Cuadrado, Mario López-Pérez, Carolina Megumi Mizuno, Inmaculada García-Heredia, Nikole E. Kimes, Purificación Lopez-García, David Moreira, David Ussery, Mila Zaballos, Rohit Ghai, and Francisco Rodriguez-Valera
    Polyclonality of Concurrent Natural Populations of Alteromonas macleodii
   
        Olga K. Kamneva, Stormy J. Knight, David A. Liberles, and Naomi L. Ward
    Analysis of Genome Content Evolution in PVC Bacterial Super-Phylum: Assessment of Candidate Genes Associated with Cellular Organization and Lifestyle
   
        Julia F. Hopkins, David F. Spencer, Sylvie Laboissiere, Jonathan A.D. Neilson, Robert J.M. Eveleigh, Dion G. Durnford, Michael W. Gray, and John M. Archibald
    Proteomics Reveals Plastid- and Periplastid-Targeted Proteins in the Chlorarachniophyte Alga Bigelowiella natans
   
Letter

        Yuri I. Wolf and Eugene V. Koonin
    A Tight Link between Orthologs and Bidirectional Best Hits in Bacterial and Archaeal Genomes
   
        Thomas Schott, Pradeep Kumar Kondadi, Marja-Liisa Hänninen, and Mirko Rossi
    Microevolution of a Zoonotic Helicobacter Population Colonizing the Stomach of a Human Host before and after Failed Treatment
   
        Ibrar Ahmed, Patrick J. Biggs, Peter J. Matthews, Lesley J. Collins, Michael D. Hendy, and Peter J. Lockhart
    Mutational Dynamics of Aroid Chloroplast Genomes
    
        Patrícia Isabel Marques, Rui Bernardino, Teresa Fernandes, Eric D. Green, Belen Hurle, Victor Quesada, Susana Seixas and NISC Comparative Sequencing Program
    Birth-and-Death of KLK3 and KLK2 in Primates: Evolution Driven by Reproductive Biology
   
        Niyaz Yoosuf, Natalya Yutin, Philippe Colson, Svetlana A. Shabalina, Isabelle Pagnier, Catherine Robert, Said Azza, Thomas Klose, Jimson Wong, Michael G. Rossmann, Bernard La Scola, Didier Raoult, and Eugene V. Koonin
    Related Giant Viruses in Distant Locations and Different Habitats: Acanthamoeba polyphaga moumouvirus Represents a Third Lineage of the Mimiviridae That Is Close to the Megavirus Lineage
  
Erratum

        Danielle Venton
    Highlight—Lowly Sea Cucumber Leads the Evolutionary Race
   
============
 EXBINO

wtorek, 26 czerwca 2012

Archives of Phytopathology and Plant Protection - 44 (5), 2011





Contents:

Molecular characterisation of coat protein and nuclear shuttle protein genes of Banana bunchy top virus from Western Ghats in India
 Kavino, Mathiyazhagan; Harish, Sankarasubramanian; Kumar, Neelakandan; Saravanakumar, Duraisamy; Samiyappan, Ramasamy

In vitro efficacy of plant essential oils against Phomopsis azadirachtae - the causative agent of die-back disease of neem
 Nagendra Prasad, M.N.; Shankara Bhat, S.; Nivedita Dharwar, V.; Shraddha Mehta, B.; Chauhan, Abhinav

Phytochemical, acaricidal and biological activity of Dodonaea viscosa L. against the two spotted spider mite Tetranychus urticae Koch
 El-Gengaihi, Souad; Dimetry, Nadia; Amer, Sanaa

Phylogenecity and sequence alignment of Fusarium mycotoxin gene (Fum 5) with other mycotoxin producing fungi
 Karthikeyan, V.; Karthikeyan, P. P.; Saravanakumar, D.; Patharajan, S.; Saravanakumar, P.; Titone, Patrizia; Spadaro, Davide; Lodovica Gullino, M.; Garibaldi, Angelo

Control of chickpea wilt (Fusarium oxysporum f.sp. ciceris) using Trichoderma spp. in Ethiopia
 Meki, S.; Ahmed, S.; Sakhuja, P. K.

Repellency and toxicity of extract from Francoeria crispa (Forsk.) to Eutetranychus orientalis (Klein) (Acari: Tetranychidae)
 Abdel-Khalek, Amira; Amer, Sanaa; Momen, Faten

Larvicidal and insecticidal properties of Ricinus communis seed extracts obtained by different methods against Tribolium castaneum Herbst (Coleoptera: Tenebrionidae)
 Babarinde, Samuel; Oyegoke, Oyebamiji; Adekunle, Adeyemi

Induction of systemic resistance in Lycopersicon esculentum cv. PKM1 (tomato) against Cucumber mosaic virus by UV-B irradiation on calli
 Sudhakar, N.; Murugesan, K.

First record on epizootics of Entomophthora grylli on grasshopper in Indian subcontinent: pathogen city and bio control potential on Oxya velox
 Gupta, R. K.; Jaronski, Stefan; Srivastava, K.; Bali, K.

Demography of greenbug, Schizaphis graminum (Rondani) (Hemiptera: Aphididae) on six barley cultivars
 Tofangsazi, N.; Kheradmand, K.; Shahrokhi, S.; Talebi, A. A.

Direct effect of biocontrol agents on wilt and root-rot diseases of sesame
 Elewa, I. S.; Mostafa, M. H.; Sahab, A. F.; Ziedan, E. H.

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środa, 18 kwietnia 2012

African Journal of Biotechnology - 10 (75-76), 2011

African Journal of Biotechnology - 10 (75), 2011


Contents:

Research Articles


GENETICS AND MOLECULAR BIOLOGY


Jinsong Chen, Conglin Huang, Xiuhai Zhang, Rong Yu and Zhongyi Wu

Detection of herbicide-resistant maize by using loop-mediated isothermal amplification of the pat selectable marker gene


Qian Wang, Yucheng Zhang, Min Gao, Chen Jiao and Xiping Wang

Identification and expression analysis of a pathogen-responsive PR-1 gene from Chinese wild Vitis quinquangularis


Musa Hasan Abu Zarga and Mukaram Shikara

NADP+- dependent isocritrate dehydrogenase from human kidney mitochondria


Avinash Pandey, Amit Kumar and Ramya P

Genetic diversity in green gram accessions as revealed by STMS markers


Yongxin Liu, Guixing Wang, Yi Liu, Jilun Hou, Yufen Wang, Fei Si, Zhaohui Sun, Xiaoyan Zhang and Haijin Liu

Production and verification of heterozygous clones in Japanese flounder, Paralichthys olivaceus by microsatellite marker


Ahmed Nagib Sharaf, Ahmed Gaber, Abdelhadi Abdallah Abdelhadi Abdelshafy Ibrahim Ragab and Walid Ahmed Korani

Induction, characterization and genetic analysis of Aspergillus flavus resistant mutants in Arachis hypogaea


Zhiyong Wang, Li Liao, Xuejun Yuan, Aigui Guo and Jianxiu Liu

Genetic relationships of bermudagrass (Cynodon dactylon var. dactylon) from different countries revealed by sequence-related amplified polymorphism (SRAP) analysis
 

PLANT AND AGRICULTURAL TECHNOLOGY

 
Hatira Taşkin, Saadet Büyükalaca, Davut Keleş and Ercan Ekbiç

Induction of microspore-derived embryos by anther culture in selected pepper genotypes


Kalpana Sengar, R. S. Sengar and Sanjay Kumar Garg

The effect of in-vitro environmental conditions on some sugarcane varieties for micropropagation


Yousaf Jamal, Muhammad Shafi and Jehan Bakht

Effect of seed priming on growth and biochemical traits of wheat under saline conditions


Zhenming Zhang, Siming Song, Hailong Wu, Xinxiao Yu and Qian Zhang

Factors affecting soil erosion in Beijing mountain forestlands


Sureyya Altintas

Effects of prohexadione-calcium with three rates of phosphorus and chlormequat chloride on vegetative and generative growth of tomato


Özlem Tuncay

Relationships between nitrate, chlorophyll and chromaticity values inrocket salad and parsley


Sureyya Altintas

Effects of chlormequat chloride and different rates of prohexadione-calcium on seedling growth, flowering, fruit development and yield of tomato


Funda Eryilmaz Acikgoz

Mineral, vitamin C and crude protein contents in kale (Brassica oleraceae var. acephala) at different harvesting stages


Mahdi, Babaeian, Yasser, Esmaeilian, Abolfazl, Tavassoli and Mehdi, Javaheri

Interaction of micro and macro elements with manure on barley feed yield and soil nutrient content in Sistan region


ENVIRONMENTAL BIOTECHNOLOGY

 
Tong Bao, Tieheng Sun and Lina Sun

Low molecular weight organic acids in root exudates and cadmium accumulation in cadmium hyperaccumulator Solanum nigrum L. and non-hyperaccumulator Solanum lycopersicum L.


Tian-Nv Wang, Lei Lu, Guo-Fu Li, Jun Li, Teng-Fei Xu, Min Zhao

Decolorization of the azo dye reactive black 5 using laccase mediator system


Rafi Ullah, Jehan Bakht, Mohammad Shafi, Madiha Iqbal, Ayub Khan and Muhammad Saeed

Phyto-accumulation of heavy metals by sunflower (Helianthus annuus L.) grown on contaminated soil


Zheng Zi-Cheng, LI Ting-Xuan, Xiao Guang-Li, Zhang Xi-Zhou, Yu Hai-Ying and Wang Yong-Dong

Mineral composition of dominant plant species growing in a phosphorus mining area


Oguz Kurdoglu and Başak Avcioglu Çokçalişkan

Assessing the effectiveness of protected area management in the Turkish Caucasus


Ali BÜLBÜL, Tugbanur ÖZEN and Gültekin TARCAN

Hydrogeochemical and hydrogeological investigations of thermal waters in the Alasehir-Kavaklidere area (Manisa-Turkey)


INDUSTRIAL MICROBIOLOGY

 
Shi-jun Yu, Ying Zhang, Chun-ru Li, Qian Zhang, Zhong-you Ma and Mei-zhen Fan

Optimization of ultrasonic extraction of mycelial polysaccharides from Paecilomyces hepiali using response surface methodology and its antioxidant activity


FOOD MICROBIOLOGY

 
Farid Bensalah, Asmaa Labtar, Christine Delorme and Pierre Renault

Occurrence, isolation and DNA identification of Streptococcus thermophilus involved in Algerian traditional butter ‘Smen’


FOOD TECHNOLOGY

 
Omojola, Moses O., Afolayan, Michael O., Adebiyi, Adedayo B., Orijajogun, Joyce O., Thomas, Sunday A. and Ihegwuagu, Nnemeka E.

Further physicochemical characterization of Parkia biglobosa (Jacq.) Benth fruit pulp as a mineral supplement


Farzana Siddique, Kiran Sultan Khan, Asif Ahmad, Anwaar Ahmed, Muhammad Gulfraz and Feroza Hamid Wattoo

Development and optimization of sweet cream butter from buffaloes at cottage scale


APPLIED BIOCHEMISTRY


Margaret Oluwatoyin Sofidiya, Busola Oduwole, Elizabeth Bamgbade, Olukemi Odukoya and Sunday Adenekan

Nutritional composition and antioxidant activities of Curculigo pilosa (Hypoxidaceae) rhizome


Yun Liu, Junkai Wang, Yunjun Yan and Jiangchuan Li

Biocatalytic synthesis and antioxidant capacities of ascorbyl esters by Novozym 435 in tert-butanol system using different acyl donors


He Ying, Zhang Nian-zhang, Zhao Ping, Chu Yue-feng, Gao Peng-cheng, Zhang Jian-jun and Lu Zhong-xin

Improvement of specific polymerase chain reaction (PCR) for the identification of Mycoplasma capricolum subsp. capripneumoniae


MEDICAL AND PHARMACEUTICAL BIOTECHNOLOGY

 
Olayinka A. Aiyegoro and Sandra van Dyk

The antioxidant properties, cytotoxicity and monoamine oxidase inhibition abilities of the crude dichloromethane extract of Tarchonanthus camphoratus L. leaves


Saadia Shahzad Alam, Samreen Riaz and M. Waheed Akhtar

Effect of high dose thiamine therapy on activity and molecular aspects of transketolase in Type 2 diabetic patients


D. O. Awoniyi, Y. G. Aboua, J. L. Marnewick, S. S. du Plesis and N. L. Brooks

Protective effects of rooibos (Aspalathus linearis), green tea (Camellia sinensis) and commercial supplements on testicular tissue of oxidative stress-induced rats


BIOTECHNIQUES

 
Gong Cheng, Fangrong Ding, Yunping Dai and Ning Li

Targeting the human lysozyme gene on bovine ?s1-casein gene locus in fibroblasts


Yingchun Qi, Yaomei Ye and Manzhu Bao

Establishment of plant regeneration system from anther culture of Tagetes patula


Kuen-Chang Hsieh, Ming-Feng Kao, Tsong-Rong Jang, Wen-Lang Lin, Hsueh-Kuan Lu and Yu-Yawn Chen

Estimation of segmental fat free mass in Taiwanese elderly females by bioelectrical impedance analysis with new mathematical model


ANIMAL SCIENCE

 
Farjad Rafeie, Cyrus Amirinia, Ardeshir Nejati Javaremi, Seyed Ziaeddin Mirhoseini and Nour Amirmozafari

A study of patrilineal genetic diversity in Iranian indigenous horse breeds


Wang Hong, Zan LinSen, Cheng Gong, Wang HongBao and Fu ChangZhen

Molecular cloning, expression analysis and sequence prediction of CCAAT/enhancer-binding protein beta gene of Qinchuan cattle


Muhammad Naeem, Amina Zuberi, Abdus Salam, Muhammad Ali, Muhammad Riaz-ul-Haq, Muhammad Khalid, Mudasra Mehreen, Muhammad Farhan Nasir, Saeed Akhtar Rasool and Abir Ishtiaq

Some morphometric relationships of hatchery reared male population of Oreochromis mossambicus from Pakistan


Mingyan Shi, Xue Gao, Hongyan Ren, Zhengrong Yuan, Huiguang Wu, Jiao Li, Lupei Zhang, Huijiang Gao, Junya Li and Shangzhong Xu

Association analysis of CAPN1 gene variants with carcass and meat quality traits in Chinese native cattle


Navid Mogadam and Aidin Azizpour

Ameliorative effect of glucomannan-containing yeast product (Mycosorb) and sodium bentonite on performance and antibody titers against Newcastle disease in broilers during chronic aflatoxicosis


Maryam Royan, Goh Yong Meng, Fauziah Othman, Awis Qurni Sazili and Bahman Navidshad

Effects of dietary conjugated linoleic acid (CLA), n-3 and n-6 fatty acids on performance and carcass traits of broiler chickens

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African Journal of Biotechnology - 10 (76), 2011


Contents:

Review

 
Suchitra Muenthaisong, Andras Dinnyes and Tshimangadzo Lucky Nedambale

Review of somatic cell nuclear transfer in pig


Research Articles

 
GENETICS AND MOLECULAR BIOLOGY

 
F. Ebrahimi, G. Mohammadi-Nejad, A. Baghizadeh and M. Abdolinejad

Genetic diversity evaluation of rapeseed genotypes (Brassica napus L.) based on phenotypic traits and random amplified polymorphic DNA (RAPD) markers


Gerald Otti, Ayodele Fakoya, Ikpan Andrew and Melaku Gedil

Development of genomic tools for verification of hybrids and selfed progenies in cassava (Manihot esculenta)


Ping Cao, Jing Sun, Peng Zhao, Heng Liu and Guochang Zheng

A new putative plasmodesmata-associated protein, At1g19190, in Arabidopsis


Jiali Dong, Yunyun Jiang, Rongjun Chen, Zhengjun Xu and Xiaoling Gao

Isolation of a novel xyloglucan endotransglucosylase (OsXET9) gene from rice and analysis of the response of this gene to abiotic stresses


Sun, Y. L., Wang, D., Lee, H. B., Park, W. G., Kwon, O. W. and Hong, S. K.,

Phylogeny of Korean Hornbeam (Carpinus turczaninovii) based on nuclear ribosomal ITS sequence


PLANT AND AGRICULTURAL TECHNOLOGY

 
Liqing Du, Hui Zeng, Minghong Zou, Hanzhou Zhang, Lianfang Luo and Chaozhong Lu

Characters analysis of the Macadamia cv. Ikaika (333) germplasm resource


JIN Xiao-Ming, AI Lin, LIU Ji-Dong and LU Xin-Shi

The dynamics of age structures on Agropyron michnoi and Leymus chinensis in community with two dominant species populations


Süleyman Korkut

Physical and mechanical properties and the use of lesser-known native Silver Lime (Tilia argentea Desf.) wood from Western Turkey


Li Xia, Wang Chao and Ren Chenggang

Effects of 1-butanol, neomycin and calcium on the photosynthetic characteristics of pepc transgenic rice


Maheshwari .R. Bhadragoudar and Chandrashekhar .G. Patil

Assessment of genetic diversity among Capsicum annuum L. genotypes using RAPD markers


Agathar Kamota, Pardon Muchaonyerwa and Pearson N. S. Mnkeni

Effects of ensiling of Bacillus thuringiensis (Bt) maize (MON810) on degradation of the crystal 1Ab (Cry1Ab) protein and compositional quality of silage


Ruo-Fei Yang, Wan-Chen Li, Jing He, Shu-Feng Zhou, Yue-Hui She and Feng-Ling Fu

Inducement and identification of an endosperm mutant in maize


ENVIRONMENTAL BIOTECHNOLOGY


Yanling Li, Zhijun Gong and Ji Shen

Diatom distribution in the surficial sediments of Lake Fuxian, Yunnan Plateau, China


Nannan Zhang, Yawen Fan and Yixin Liu

Relationship between diatom communities and environmental conditions at Honghe wetland, China


INDUSTRIAL MICROBIOLOGY

 
Jinpeng Wang, Xuexia Ji, Yuxiang Bai, Zhengyu Jin1, Xueming Xu and Yin Li

Effects of fermentation conditions on the production of 4-?-glucanotransferase from recombinant Escherichia coli


APPLIED BIOCHEMISTRY

 
Saleh A. Mohamed, Azza M. Abdel-Aty, Mohamed Belal Hamed, Mohamed O. El-Badry and Afaf S. Fahmy

Ficus sycomorus latex: A thermostable peroxidase


Horieh Saderi and Maryam Abbasi.

Evaluation of anti-adenovirus activity of some plants from Lamiaceae family grown in Iran in cell culture


Joseph M. K. Mulema, Patrick Okori and Katherine J. Denby

Proteomic analysis of the Arabidopsis thaliana-Botrytis cinerea interaction using two-dimensional liquid chromatography


Muhammad Rashid Khan, Azra Memon, Gul Nabi Khan, Maria Shabbir, Naima Saeed, Naseer Ali Shah, Jasia Bokhari, and Umbreen Rashid

Protective effects of Digera muricata (L.) Mart. against carbon tetrachloride induced oxidative stress in thyroid of rat


Chuanhui Fan, Zhanmin Liu and Lifeng Yao

Medium optimization for protopectinase production by batch culture of Aspergillus terreus


MEDICAL AND PHARMACEUTICAL BIOTECHNOLOGY


Tao Kong, Yusen Jia, Jingzhe Yang, Xin Wang, Chunsong Jia and Limin Liao

Down-regulation of Notch-1 by ?-secretase inhibitor suppress the proliferation and migration of prostate cancer cells


Ying Yang, Bo Yu, Yuan Gao and Guiping Wu

Atorvastatin reverses the effects of interleukin-1ß (IL-1ß) on membrane potential in cultured rat aorta smooth muscle cells by activating big conductance Ca2+-activated K+ channels (BK) and scavenging hydrogen dioxide


Parnian Alizadeh Oskoee, Elmira Jafari Navimipour, Siavash Savadi Oskoee, Mahmoud Bahari and Fatemeh Pournaghiazar

Effect of different adhesion strategies on push-out bond strength of fiber reinforced composite posts


ENTOMOLOGY

 
Miao Xie, Min-sheng You, Juan Cheng and Liette Vasseur

A proteomic analysis of short-term exposure to fipronil in larvae of Plutella xylostella


FISHERY SCIENCE


H. Raeisi, S. A. Hosseini, S. Y. Paighambari, S. A. A. Taghavi and R. Davoodi

Species composition and depth variation of cutlassfish (Trichiurus lepturus L. 1785) trawl bycatch in the fishing grounds of Bushehr waters, Persian Gulf


Hangjun Wang, Liyan Zhang, Xiaowan Chen and Shaoxiong Ding

Characterization of single nucleotide polymorphism (SNP) markers for the Chinese black sleeper, Bostrychus sinensis


ANIMAL SCIENCE


Mukesh, Ruheena Javed, Uma Gaur, Han Jianlin and S. Sathyakumar

Cross-species applicability of chicken microsatellite markers for investigation of genetic diversity in Indian duck (Anas platyrhynchos) populations


Gholamreza Kavoosi

Zataria multiflora essential oil reduces diabetic damages in streptozotocin-induced diabetic rats


Houda Bouraoui, Elena Vendramin, Andrea Squartini, and Mohamed-Laid Haddi

Taxonomical analysis of the suspended bacterial fraction in the dromedary rumen fluid

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środa, 11 kwietnia 2012

African Journal of Biotechnology - 10 (52-53), 2011





African Journal of Biotechnology - 10 (52), 2011


Contents:


Research Articles


GENETICS AND MOLECULAR BIOLOGY


Faiza Masmoudi-Allouche, Radhia Gargouri-Bouzid, Walid Kriaâ, Mohammed Najib Saidi, Hajer Jamoussi, Yosr Abdelkefi and Noureddine Drira

Investigation of genetic variability related to the in vitro floral hermaphrodism induction in Date palm (Phonix dactylifera L.)


Qian Wang, Jianli Sun, Li Bao, Jinpan Lian and Huixian Zhao

Twenty putative palmitoyl-acyl transferase genes with distinct expression patterns in Arabidopsis thaliana


PLANT AND AGRICULTURAL TECHNOLOGY


Abdollah Bahrani, Hosein Heidari, Sharif Abad and Amir Aynehband

Nitrogen remobilization in wheat as influenced by nitrogen application and post-anthesis water deficit during grain filling


Iram Fatma Jafri, Ainul Haq Khan and Mohd Gulfishan

Genotoxic effects of 5-bromouracil on cytomorphological characters of Cichorium intybus L.


Periasamy Suranthran, Uma Rani Sinniah, Sreeramanan Subramaniam, Maheran A. Aziz, Nordin Romzi and Saikat Gantait

Effect of plant growth regulators and activated charcoal on in vitro growth and development of oil palm (Elaeis guineensis Jacq. var. Dura) zygotic embryo


Nasser E. Ibrahim, Hanan Shaaban and Andreas Krell

Studies on new antifreeze protein from the psychrophilic diatom, Fragilariopsis cylindrus


Sudarat Thanonkeo, Nuttaporn Chamnipa and Pornthap Thanonkeo

Induced accumulation of 20-hydroxyecdysone in cell suspension cultures of Vitex glabrata R.Br.


Junejo, N., Khanif, M. Y., Hanfi, M. M., Dharejo, K. A. and Wan, Z. W. Y.

Reduced loss of NH3 by coating urea with biodegradable polymers, palm stearin and selected micronutrients

 
Mostafa Ebadi and Alireza Iranbakhsh

The induction and growth of potato (Solanum tuberosum. L) microtubers (sante cultivar) in response to the different concentrations of 6-benzylaminopurine and sucrose

 
ENVIRONMENTAL BIOTECHNOLOGY


Soumaya Arraouadi, Mounawer Badri, Wael Taamalli, Thierry Huguet and Mohamed Elarbi Aouani

Variability salt stress response analysis of Tunisian natural populations of Medicago truncatula (Fabaceae) using salt response index (SRI) ratio

     
Shu-Cheng Liang, Min Zhao, Lei Lu, Chun-Lei Wang, Li-Yan Zhao and Wen-Jin Liu

Isolation and characteristic of an aerobic denitrifier with high nitrogen removal efficiency

   
Jaime Alioscha Cuervo-Parra, Montserrat Ramírez-Suero, Vladimir Sánchez-López and Mario Ramírez-Lepe

Antagonistic effect of Trichoderma harzianum VSL291 on phytopathogenic fungi isolated from cocoa (Theobroma cacao L.) fruits


Shazia Nouren, Haq Nawaz Bhatti and Sadia Ilyas

Bioleaching of copper, aluminum, magnesium and manganese from brown shale by Ganoderma lucidum


Ghafoori, M., Nik M. Majid, Islam, M. M. and Sylvia Luhat

Bioaccumulation of heavy metals by Dyera costulata cultivated in sewage sludge contaminated soil

  
INDUSTRIAL MICROBIOLOGY


Ahmed M. El-Bondkly, Aboshosha, A. A. M., Radwan, N. H.2 and Dora, S. A.

Application and comparison of two different intraspecific protoplast fusion methods in Trichoderma harzianum and their effect on ß-glucosidase activity

   
Pornthap Thanonkeo, Sudarat Thanonkeo, Kannikar Charoensuk and Mamoru Yamada

Ethanol production from Jerusalem artichoke (Helianthus tuberosus L.) by Zymomonas mobilis TISTR548

  
FOOD TECHNOLOGY


Zi-Gang Li, Xiao-Yu Yue, Yan-Juan Liu and Yi-Xing Zhang

Effect of calcium salts and tri-sodium citrate on certain properties of calcium-fortified soy milk


Teramoto, Y., Koguchi, M., Wongwicharn, A. and Saigusa, N.

Production and antioxidative activity of alcoholic beverages made from Thai ou yeast and black rice (Oryza sativa var. Indica cv. Shiun)


APPLIED BIOCHEMISTRY


Minoo Yaghmaei, Saeedeh Salimi, Mojgan Mokhtari, Anoosh Naghavi, Mohsen Saravani, and Farzaneh Farajian- Mashhadi

Endothelial nitric oxide synthase gene Glu298Asp polymorphism and risk of preeclampsia in South East of Iran


Nazmi Saritaş, Kadir Yildiz, Serdar Büyükipekci and Betül Coşkun

Effect of different levels of royal jelly on biochemical parameters of swimmers


Byung Hoon Park, Deok Jung Kim, Kun Woo Park, Mun Soo Park, Yo Han Son, Na Yeon Woo, Yoo Jin Yi, Hyoung Jun Lee, Yong Min Lee, In Sub Choi, Hyo Jeong Lee, Jae Won Park, Sung Mook Yoo, Su Chan Lee, Jae Deok Lee, Jae Shin Lim and Sangdeog A. Kim

Iron content in forage sorghum (Sorghum bicolor (L.) Moench) measured on different slit widths with atomic absorption spectrometry

  
MEDICAL AND PHARMACEUTICAL BIOTECHNOLOGY


Salwa M. Abdel Rahman, Sawsan A. Abd-Ellatif, Sahar F. Deraz and Ashraf A. Khalil

Antibacterial activity of some wild medicinal plants collected from western Mediterranean coast, Egypt: Natural alternatives for infectious disease treatment


Swee Keong Yeap, Abdul Rahman Omar, Wan Yong Ho, Boon Kee Beh, Abdul Manaf Ali and Noorjahan Banu Alitheen

Immunomodulatory effect of Rhaphidophora korthalsii on mice splenocyte, thymocyte and bone marrow cell proliferation and cytokine expression


Ghaffari, J., Naghshvar, F., Nazari, Z.1, Farid, R., Torabizadeh, J. and Madani, F.

Seroprevalence of human T-cell lymphotropic virus type 1 infection (HTLV1) in different patients in the north of Iran


Ruzanna Ab Kadir, Shahrul Hisham Zainal Ariffin, Rohaya Megat Abdul Wahab, Sahidan Senafi and Fahrul Zaman Huyop

Differentiation potential of human suspension mononucleated peripheral blood cells


FISHERY SCIENCE


Muhammad Naeem and Abir Ishtiaq

Proximate composition of Mystus bleekeri in relation to body size and condition factor from Nala Daik, Sialkot, Pakistan


BIOTECHNIQUES


Rodrigo da Silva Guedes, Tatiane Loureiro da Silva, Zanderluce Gomes Luis and Jonny Everson Scherwinski-Pereira

Initial requirements for embryogenic calluses initiation in thin cell layers explants from immature female oil palm inflorescences

   
Dongwu Liu, Xue Wang, Yousheng Lin, Liying Sun, Zhiwei Chen and Hongzhi Xu

Analysis of the effects of cerium on calcium ion in the protoplasts of Arabidopsis thaliana with confocal microscopy


Zhen Feng, Jing Ren, Yanhe Zhang and Sen Hu

Improved secretory production of calf prochymosin by codon optimization and disruption of PMR1 in Kluyveromyces lactis GG799


PHARMACEUTICAL SCIENCE


M. Afzal, F. S. Mehdi, Fida M.Abbasi, Habib Ahmad, R. Masood, Inamullah, Jan Alam, Gul Jan, M. Islam , Noor Ul Amin , A. Majid1 , M. Fiaz and A.H.Shah

Efficacy of Avicennia marina (Forsk.) Vierh. leaves extracts against some atmospheric fungi

 
ANIMAL SCIENCE


Saied Habibian Dehkordi, Fatemeh Hosseinpour and Azizollah Ebrahimi Kahrizangi

An in vitro evaluation of antibacterial effect of silver nanoparticles on Staphylococcus aureus isolated from bovine subclinical mastitis

 
GENERAL AND APPLIED MICROBIOLOGY


Lejla Duraković, Andrea Skelin, Sanja Sikora, Frane Delaš, Mirna Mrkonjić-Fuka, Katarina Huić-Babić and Mihaela Blažinkov

Impact of new synthesized analogues of dehydroacetic acid on growth rate and vomitoxin accumulation by Fusarium graminearum under different temperatures in maize hybrid

       

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African Journal of Biotechnology - 10 (53), 2011


Contents:

Review


Susan Mir Najd Gerami, Safar Farajnia and Feridoun Mahboudi

Co-solute assistance in refolding of recombinant proteins


Research Articles


GENETICS AND MOLECULAR BIOLOGY


Işil Aydemir and Beyhan Gürcü

Histochemical determination of glycosaminoglycans (GAGs) in normal and ethanol-induced chick embryo during neural tube development


Syed M. Shahid, Abid Azhar, Syeda N. Nawab, Rozeena Shaikh, Muhammad Ismail and Azam J. Samdani

Single nucleotide substitution mutations and polymorphisms in ECM1 gene in lipoid proteinosis in siblings of a Pakistani family

    
Ahmad-Reza Mehrabian, Masoud Sheidai, Zahra Noormohammadi, Younes Asrei and Valeyollah Mozafarian

Inter-simple sequence repeats (ISSR) and morphological diversity in Onosma L. (Boraginaceae) species in Iran

    
Saber Khederzadeh

Polymorphism of Calpastatin Gene in Crossbreed Dalagh Sheep Using PCR-RFLP

   
PLANT AND AGRICULTURAL TECHNOLOGY

 
Montaser Fawzy Abdel- Monaim

Role of riboflavin and thiamine in induced resistance against charcoal rot disease of soybean


Tieniu Wu, Yunqiang Wang, Junwei Lv and Bo Zhang

Soil water characteristics of Middle Pleistocene paleosol layers on the loess Plateau


Sivanaswari, Chalaparmal, Thohirah, L. A., Fadelah, A. A., and Abdullah, N. A. P

Hybridization of several Aerides species and in vitro germination of its hybrid


Theerawut Wongwarat, Suchirat Sakuanrungsirikul and Piyada Theerakulpisut

Effective methods of preserving SCWL-diseased sugarcane leaves for genomic DNA extraction and molecular detection of phytoplasma

   
Seyed Habib Shojaei, Khodadad Mostafavi, Manouchehr Khodarahmi and Mohammad Zabet

Response study of canola (Brassica napus L.) cultivars to multi-environments using genotype plus genotype environment interaction (GGE) biplot method in Iran


Muammer Tepe and Tülin Aydemir

Antioxidant responses of lentil and barley plants to boron toxicity under different nitrogen sources


Liu Sheng-hui, Zang Xiao-ping and Sun Guang-ming

Changes in endogenous hormone concentrations during inflorescence induction and development in pineapple (Ananas comosus cv. Smooth Cayenne) by ethephon


Johari-Pireivatlou, Moharram and Maralian, Habib

Evaluation of 10 wheat cultivars under water stress at Moghan (Iran) condition

 
Xuan Chen, Tongkun Liu, Shan Hao, Wanping Fang, Yuhua Wang and Xinghui Li

Differential gene expression analysis of self-incompatible lines in tea by cDNA-AFLP


Mehrdad Yarnia, Narges Arabifard, Farrokh Rahimzadeh Khoei and Peiman Zandi

Evaluation of drought tolerance indices among some winter rapeseed cultivars

   
Lixia Zhang, Yajun Zhang and Liping Zhang

Structure and immunological activity of a novel polysaccharide from the spores of Ganoderma lucidum

   
ENVIRONMENTAL BIOTECHNOLOGY


Xue Hongqin, Jing Zhaoqian and Liu Xiaodong

Cr (VI) removal from aqueous solutions by fly ash and fly ash composite filter material: Factorial experimental design

   
Ihab Mohamed Ibrahim Moussa

Finger printing of community acquired-methicillin resistance Staphylococcus aureus recovered from King Saudi Arabia

  
Jing-wei Jin, Hui-chun Ye, Yue-fei Xu, Chong-yang Shen and Yuan-fang Huang

Spatial and temporal patterns of soil fertility quality and analysis of related factors in urban-rural transition zone of Beijing

 
Sema Alikamanoglu and Ayse Sen

Stimulation of growth and some biochemical parameters by magnetic field in wheat (Triticum aestivum L.) tissue cultures


Myung Ja Kwak, Seong Han Lee and Su Young Woo

Growth and anatomical characteristics of different water and light intensities on cork oak (Quercus suber L.) seedlings

 
FOOD TECHNOLOGY


Olutayo Sunday Shokunbi, Ogochukwu Augustine Anionwu, Oluwatosin Sarah Sonug and Grace Oluwatoyin Tayo

Effect of post-harvest processing on the nutrient and anti-nutrient compositions of Vernonia amygdalina leaf

 
APPLIED BIOCHEMISTRY


Otitoju, O., Onwurah, I. N. E., Otitoju, G. T. O., Ndem, J. I. and Uwah, A. F.

Effect of Bonny light crude oil contaminated diet on serum cholesterol and testosterone concentrations in Wistar albino rats

 
Shoeb Ahmad and Ravi Kant Upadhyay

Production of polyclonal antibodies against Indian honeybee (Apis indica) venom toxins and its efficacy in reversal of toxic effects

 
Guihong Lan, Zengting Li, Hui zhang, Changjun Zou, Dairong Qiao and Yi Cao

Relationship of microbial diversity from recycled injection water and high-temperature petroleum reservoirs analyzed by polymerase chain reaction denaturing gradient gel electrophoresis (PCR-DGGE)

     
MEDICAL AND PHARMACEUTICAL BIOTECHNOLOGY


T. A. Tor-Anyiin, M. U. Akpuaka and H. O. A. Oluma

Phytochemical and antimicrobial studies on stem bark extract of Sterculia setigera, Del.

     
Wilfred Fon Mbacham, Leopold Djomkam Tientcheu, Veronique Beng Penlap, Christopher Kuaban, Sara Eyangoh, Hubert Wang, Jean Bickii, Palmer Masumbe Netongo, William Titi Lembe, Olama Abega, Njikam Njifutie, Teyim Pride and Baldip Khan

Detection of resistance-associated mutations in Mycobacterium tuberculosis isolates in Cameroon using a dot-blot hybridisation technique

       
Baokang Huang, Zhiyong Chu, Weiping He and Luping Qin

IChemical composition, anti-inflammatory and analgesic activities of the petrol ether extract of Pinellia cordata


HaiLin Ren, Yan Sun, XiaoNa Li, HaiLong Hu, ShiBing Li, EnLi Liang and RuiFa Han

Expression of E2F3, miR-17-5p, miR-20a and their interplay in bladder cancer

  
FISHERY SCIENCE


Huriye Ariman Karabulut and N. Mevlut Aras

Effects of different water temperatures and growth agent (recombinant human somatotropin) (r-hGH) on features such as growth, condition factor, feed conversion ratio, survival rate and meat composition of rainbow trout (Oncorhynchus mykiss) fingerlings

  
Hmoud Fares Alkahemal-Balawi, Zubair Ahmad, Ali Suliman Al-Akel, Fahad Al-Misned, El-Amin Mohamad Suliman and Khalid Abdullah Al-Ghanim

Toxicity bioassay of lead acetate and effects of its sub-lethal exposure on growth, haematological parameters and reproduction in Clarias gariepinus

     
Muhammad Naeem, Amina Zuberi, Abdus Salam, Muhammad Ashraf, Noor Elahi, Muzaffar Ali, Abir Ishtiaq, Tayyaba Malik, Muhammad Jamshed Khan, Muhammad Mazhar Ayaz, Muhammad Javed Iqbal and Bilal Ahmad

Induced spawning, fecundity, fertilization rate and hatching rate of Grass carp (Ctenopharyngodon idella) by using a single intramuscular injection of ovaprim–C at a fish hatchery Faisalabad, Pakistan


Muhammad Naeem, Abdus Salam, Muhammad Yunas Khokhar, Muhammad Farhan Nasir, Muhammad Fahad Nouman, Abir Ishtiaq and Razia Allah Yar

Evaluation of metal contents in female Oreochromis niloticus with emphasis on potential risk of consumption and relation to some biological aspects

     
BIOTECHNIQUES

 
Wen-rui Cao, Guo-li Gong, Xin-li Liu, Wei Hu, Zhi-feng Li, Hong Liu and Yue-zhong Li

Optimization of epothilone B production by Sorangium cellulosum using multiple steps of the response surface methodology


Muhammad Arshad, Muhammad Anjum Zia, Muhammad Asghar and HaqNawaz Bhatti

Improving bio-ethanol yield: Using virginiamycin and sodium flouride at a Pakistani distillery

   
ANIMAL SCIENCE


Sawsan A. Omer, Wafa A. I. Al-Megrin, Abdulaziz N. Alagaili, Mai A. Elobeid and Osama B. Mohammed

A new protocol for the treatment of Brucella melitensis in Neumann’s gazelle (Gazella erlangeri) from Saudi Arabia using oxytetracycline and streptomycin

     
Amina E. Essawy, Ashraf M. Abdel-Moneim, Ibrahim A. Gaaboub and Soad A. El-Sayed

Adverse effects of dimethyl disulphide on sciatic nerve of Swiss albino mice


     

środa, 4 kwietnia 2012

African Journal of Biotechnology - 10 (49), 2011




Contents:


Research Articles

 
PLANT AND AGRICULTURAL TECHNOLOGY

 
H. Shi, J.Y.Zheng, H.B.Shao, H.X.Wang and F.Q. Chen

A simple method for estimating the convection-dispersion equation parameters of solute transport in agricultural ecosystem


Parinya Khajudparn and Piyada Tantasawat

Relationships and variability of agronomic and physiological characters in mungbean


Sishuai Mao, M. Robiul Islam, Yuegao Hu, Xin Qian, Fei Chen and Xuzhang Xue

Antioxidant enzyme activities and lipid peroxidation in corn (Zea mays L.) following soil application of superabsorbent polymer at different fertilizer regimes


M. Simsek and N. Comlekcioglu

Effects of different irrigation regimes and nitrogen levels on yield and quality of melon (Cucumis melo L.)


ENVIRONMENTAL BIOTECHNOLOGY

 
Zhuang Wen, Duan Jizhou, Chu Liye and Shao Hongbo

Isolation of a nitrate-reducing bacteria strain from oil field brine and the inhibition of sulfate-reducing bacteria


INDUSTRIAL MICROBIOLOGY

 
Keju Jing, Xiaobin Hao and Yinghua Lu

Effect of propionate on the production of natamycin with Streptomyces gilvosporeus XM-172


APPLIED BIOCHEMISTRY

 
Latifou Lagnika, Eugenie Anago, Menonve Atindehou, Brice Adjahoutonon, Karim Dramane and Ambaliou Sanni

Antimicrobial activity of Crataeva religiosa Forst against bacteria isolated from Thryonomys swinderianus Temminck


MEDICAL AND PHARMACEUTICAL BIOTECHNOLOGY


Li Hang, Wang Jun, Guan Yanfeng, Yang Wenjun Aiying1Suo Aiying, Chu Meihua, Wang Chenyu, Jiang Jing, Zhai Shengping and Mao Qishan

Synergistic effects of ginsenoside Rg3 and cyclophosphamine on tumor growth and angiogenesis in lung cancer


Ling Zhang, Ting-Jun Hu and Chun-Ni Lu

Immunomodulatory and antioxidant activity of a Siraitia grosvenorii polysaccharide in mice


Mohammad Esmaeel Ebrahimi Chaharom, Amir Ahmad Ajami, Soodabeh Kimyai and Ahmad Abbasi

Effect of chlorhexidine on the shear bond strength of self-etch adhesives to dentin


ANIMAL SCIENCE

 
Shahzad Akbar Khan, Nisar Ujjan, Gulzar Ahmed, Muhammad Ismail Rind, Sarfaraz Ali Fazlani, Shahid Faraz, Shoaib Ahmed and Muhammad Asif

Effect of low protein diet supplemented with or without amino acids on the production of broiler


Javad Nasr, Akbar Yaghobfar, Yahya EbrahimNezhad and Kambiz NazerAdl

Effects of amino acids and metabolizable energy on egg characteristics and broiler breeder performance


+++++++++++++++

środa, 7 marca 2012

Planta - 234 (2-6), 2011



Planta - 234 (2), 2011



Contents:

Review


Pollen vacuoles and their significance

Ettore Pacini, Cédric Jacquard and Christophe Clément


Original Article


PdERECTA, a leucine-rich repeat receptor-like kinase of poplar, confers enhanced water use efficiency in Arabidopsis

Hai Tao Xing, Peng Guo, Xin Li Xia and Wei Lun Yin


Crystal structure of tarocystatin–papain complex: implications for the inhibition property of group-2 phytocystatins

Ming-Hung Chu, Kai-Lun Liu, Hsin-Yi Wu, Kai-Wun Yeh and Yi-Sheng Cheng


Gene expression changes in Arabidopsis seedlings during short- to long-term exposure to 3-D clinorotation

Hyuncheol Soh, Chungkyun Auh, Woong-Young Soh, Kyeongsik Han and Donggiun Kim, et al.


Anoxia-induced elevation of cytosolic Ca2+ concentration depends on different Ca2+ sources in rice and wheat protoplasts

Vladislav V. Yemelyanov, Maria F. Shishova, Tamara V. Chirkova and Sylvia M. Lindberg


Aluminum regulates oxalate secretion and plasma membrane H+-ATPase activity independently in tomato roots

Jian Li Yang, Xiao Fang Zhu, You Xiang Peng, Cheng Zheng and Feng Ming, et al.


Biochemical characterization, cDNA cloning, and molecular modeling of araujiain aII, a papain-like cysteine protease from Araujia angustifolia latex

Walter D. Obregón, Daniela Lufrano, Constanza S. Liggieri, Sebastián A. Trejo and Sandra E. Vairo-Cavalli, et al.


Substrate promiscuity of a rosmarinic acid synthase from lavender (Lavandula angustifolia L.)

Christian Landmann, Stefanie Hücherig, Barbara Fink, Thomas Hoffmann and Daniela Dittlein, et al.


Flowering and expression of flowering-related genes under long-day conditions with light-emitting diodes

Yoshimi Hori, Koji Nishidate, Manabu Nishiyama, Koki Kanahama and Yoshinori Kanayama


Physiological mechanisms underlying OsNAC5-dependent tolerance of rice plants to abiotic stress

Shi-Yong Song, Ying Chen, Jie Chen, Xiao-Yan Dai and Wen-Hao Zhang


Mapping QTLs for improving grain yield using the USDA rice mini-core collection

Xiaobai Li, Wengui Yan, Hesham Agrama, Limeng Jia and Xihong Shen, et al.


Flavonoid-related basic helix-loop-helix regulators, NtAn1a and NtAn1b, of tobacco have originated from two ancestors and are functionally active

Yanhong Bai, Sitakanta Pattanaik, Barunava Patra, Joshua R. Werkman and Claire H. Xie, et al.


Validation of reference genes for RT-qPCR studies of gene expression in banana fruit under different experimental conditions

Lei Chen, Hai-ying Zhong, Jian-fei Kuang, Jian-guo Li and Wang-jin Lu, et al.


Structure, expression profile and subcellular localisation of four different sucrose synthase genes from barley

Cristina Barrero-Sicilia, Sara Hernando-Amado, Pablo González-Melendi and Pilar Carbonero



Vitis vinifera VvNPR1.1 is the functional ortholog of AtNPR1 and its overexpression in grapevine triggers constitutive activation of PR genes and enhanced resistance to powdery mildew

Gaëlle Le Henanff, Sibylle Farine, Flore Kieffer-Mazet, Anne-Sophie Miclot and Thierry Heitz, et al.


Rapid Communication


The synthetic strigolactone GR24 influences the growth pattern of phytopathogenic fungi

Evgenia Dor, Daniel M. Joel, Yoram Kapulnik, Hinanit Koltai and Joseph Hershenhorn



+++++++++++++++

Planta - 234 (3), 2011



Contents:

Original Article

Regulation of multiple aquaporin genes in Arabidopsis by a pair of recently duplicated DREB transcription factors

Liina Rae, Nga T. Lao and Tony A. Kavanagh


Comparative studies on tolerance of Medicago truncatula and Medicago falcata to freezing

Li-Li Zhang, Min-Gui Zhao, Qiu-Ying Tian and Wen-Hao Zhang


A nodulin/glutamine synthetase-like fusion protein is implicated in the regulation of root morphogenesis and in signalling triggered by flagellin

Anna Doskočilová, Ondřej Plíhal, Jindřich Volc, Jana Chumová and Hana Kourová, et al.


Evidence for a role of raffinose in stabilizing photosystem II during freeze–thaw cycles

Markus Knaupp, Kumud B. Mishra, Ladislav Nedbal and Arnd G. Heyer


Ginseng root water-extracted pectic polysaccharides originate from secretory cavities

Li Yu, Yifa Zhou and J. Paul Knox


Inhibition of aconitase in citrus fruit callus results in a metabolic shift towards amino acid biosynthesis

Asfaw Degu, Bayissa Hatew, Adriano Nunes-Nesi, Ludmila Shlizerman and Naftali Zur, et al.


Deep sequencing of voodoo lily (Amorphophallus konjac): an approach to identify relevant genes involved in the synthesis of the hemicellulose glucomannan

Sascha Gille, Kun Cheng, Mary E. Skinner, Aaron H. Liepman and Curtis G. Wilkerson, et al.


Embryogenic potential and expression of embryogenesis-related genes in conifers are affected by treatment with a histone deacetylase inhibitor

Daniel Uddenberg, Silvia Valladares, Malin Abrahamsson, Jens Fredrik Sundström and Annika Sundas-Larsson, et al.


The WRKY transcription factor OsWRKY78 regulates stem elongation and seed development in rice

Chang-Quan Zhang, Yong Xu, Yan Lu, Heng-Xiu Yu and Ming-Hong Gu, et al.


Environmental regulation of stomatal response in the Arabidopsis Cvi-0 ecotype

Keina Monda, Juntaro Negi, Atsuhiro Iio, Kensuke Kusumi and Mikiko Kojima, et al.


The HyPRP gene EARLI1 has an auxiliary role for germinability and early seedling development under low temperature and salt stress conditions in Arabidopsis thaliana

Dan Xu, Xuan Huang, Zi-Qin Xu and Michael Schläppi


Dehydration-mediated activation of the xanthophyll cycle in darkness: is it related to desiccation tolerance?

B. Fernández-Marín, F. Míguez, J. M. Becerril and J. I. García-Plazaola


Functional analysis in Arabidopsis of FsPTP1, a tyrosine phosphatase from beechnuts, reveals its role as a negative regulator of ABA signaling and seed dormancy and suggests its involvement in ethylene signaling modulation

Ana Alonso-Ramírez, Dolores Rodríguez, David Reyes, Jesús A. Jiménez and Gregorio Nicolás, et al.


Chlamydomonas reinhardtii: duration of its cell cycle and phases at growth rates affected by temperature

Milada Vítová, Kateřina Bišová, Monika Hlavová, Shigeyuki Kawano and Vilém Zachleder, et al.


Cyanamide mode of action during inhibition of onion (Allium cepa L.) root growth involves disturbances in cell division and cytoskeleton formation

Dorota Soltys, Anna Rudzińska-Langwald, Wojciech Kurek, Agnieszka Gniazdowska and Elwira Sliwinska, et al.


The sucrose synthase-1 promoter from Citrus sinensis directs expression of the ß-glucuronidase reporter gene in phloem tissue and in response to wounding in transgenic plants

Stacy D. Singer, Jean-Michel Hily and Kerik D. Cox


Rapid Communication


Root starch accumulation in response to arbuscular mycorrhizal colonization differs among Lotus japonicus starch mutants

Caroline Gutjahr, Mara Novero, Tracey Welham, Trevor Wang and Paola Bonfante



+++++++++++++++
Planta - 234 (4), 2011



Contents:

Review


Piecing together the puzzle of parasitic plant plastome evolution

Kirsten Krause


Mitochondria-localized NAD biosynthesis by nicotinamide mononucleotide adenylyltransferase in Jerusalem artichoke (Helianthus tuberosus L.) heterotrophic tissues

Catello Di Martino and Maria Luigia Pallotta


Quantitative genetic analysis of salicylic acid perception in Arabidopsis

Albor Dobón, Juan Vicente Canet, Lorena Perales and Pablo Tornero


Characterization of development and artemisinin biosynthesis in self-pollinated Artemisia annua plants

Fatima Alejos-Gonzalez, Guosheng Qu, Li-Li Zhou, Carole H. Saravitz and Janet L. Shurtleff, et al.


Diverse spontaneous silencing of a transgene among two Nicotiana species

Athanasios Dalakouras, Mirko Moser, Kajohn Boonrod, Gabi Krczal and Michael Wassenegger


cGMP regulates hydrogen peroxide accumulation in calcium-dependent salt resistance pathway in Arabidopsis thaliana roots

Jisheng Li, Xiaomin Wang, Yanli Zhang, Honglei Jia and Yurong Bi


WCI, a novel wheat chymotrypsin inhibitor: purification, primary structure, inhibitory properties and heterologous expression

Antimo Di Maro, Francesca Farisei, Daniela Panichi, Valeria Severino and Natalia Bruni, et al.


Expression, subcellular localization, and cis-regulatory structure of duplicated phytoene synthase genes in melon (Cucumis melo L.)

Xiaoqiong Qin, Ardian Coku, Kentaro Inoue and Li Tian


High resolution scanning electron microscopy of plasmodesmata

Sarah Brecknock, Teresa P. Dibbayawan, Maret Vesk, Peter A. Vesk and Christine Faulkner, et al.


Bellis perennis: a useful tool for protein localization studies

Katharina Jaedicke, Jutta Rösler, Tanja Gans and Jon Hughes


Automated motion estimation of root responses to sucrose in two Arabidopsis thaliana genotypes using confocal microscopy

Nathalie Wuyts, A. Glyn Bengough, Timothy J. Roberts, Chengjin Du and M. Fraser Bransby, et al.


Structure and regulation of the Asr gene family in banana

Isabelle M. Henry, Sebastien C. Carpentier, Suzana Pampurova, Anais Van Hoylandt and Bart Panis, et al.


The polyphenol oxidase gene family in poplar: phylogeny, differential expression and identification of a novel, vacuolar isoform

Lan T. Tran and C. Peter Constabel


GmFtsH9 expression correlates with in vivo photosystem II function: chlorophyll a fluorescence transient analysis and eQTL mapping in soybean

Zhitong Yin, Fanfan Meng, Haina Song, Xiaolin Wang and Maoni Chao, et al.


Evolutionary significance of an algal gene encoding an [FeFe]-hydrogenase with F-domain homology and hydrogenase activity in Chlorella variabilis NC64A

Jonathan E. Meuser, Eric S. Boyd, Gennady Ananyev, Devin Karns and Randor Radakovits, et al.


Mechanisms of xylanase-induced nitric oxide and phosphatidic acid production in tomato cells

M. Luciana Lanteri, Lorenzo Lamattina and Ana M. Laxalt


Rapid Communication


Up-regulation of leucine aminopeptidase-A in cadmium-treated tomato roots

Latifa Boulila-Zoghlami, Philippe Gallusci, Frances M. Holzer, Gilles J. Basset and Whabi Djebali, et al.



+++++++++++++++
Planta - 234 (5), 2011



Contents:

Original Articles


A pomegranate (Punica granatum L.) WD40-repeat gene is a functional homologue of Arabidopsis TTG1 and is involved in the regulation of anthocyanin biosynthesis during pomegranate fruit development

Zohar Ben-Simhon, Sylvie Judeinstein, Talia Nadler-Hassar, Taly Trainin and Irit Bar-Ya’akov, et al.


Characterization of PSI recovery after chilling-induced photoinhibition in cucumber (Cucumis sativus L.) leaves

Zishan Zhang, Yujiao Jia, Huiyuan Gao, Litao Zhang and Haidong Li, et al.


Association mapping of dynamic developmental plant height in common wheat

Jianan Zhang, Chenyang Hao, Qian Ren, Xiaoping Chang and Guiru Liu, et al.


Peroxisomal localisation of the final steps of the mevalonic acid pathway in planta

Andrew J. Simkin, Grégory Guirimand, Nicolas Papon, Vincent Courdavault and Insaf Thabet, et al.


MusaDHN-1, a novel multiple stress-inducible SK3-type dehydrin gene, contributes affirmatively to drought- and salt-stress tolerance in banana

Upendra K. Singh Shekhawat, Lingam Srinivas and Thumballi R. Ganapathi


The alleles at the E1 locus impact the expression pattern of two soybean FT-like genes shown to induce flowering in Arabidopsis

Dhiraj Thakare, Saratha Kumudini and Randy D. Dinkins


Simultaneous post-transcriptional gene silencing of two different chalcone synthase genes resulting in pure white flowers in the octoploid dahlia

Sho Ohno, Munetaka Hosokawa, Misa Kojima, Yoshikuni Kitamura and Atsushi Hoshino, et al.


EST analysis of functional genes associated with cell wall biosynthesis and modification in the secondary xylem of the yellow poplar (Liriodendron tulipifera) stem during early stage of tension wood formation

Hyunjung Jin, Jihye Do, Dahyun Moon, Eun Woon Noh and Wook Kim, et al.


Histological and molecular studies of the non-host interaction between wheat and Uromyces fabae

Hongchang Zhang, Chenfang Wang, Yulin Cheng, Xiaojie Wang and Feng Li, et al.


Unique cell wall abnormalities in the putative phosphoinositide phosphatase mutant AtSAC9

Almut H. Vollmer, Nabil N. Youssef and Daryll B. DeWald


Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice

Hao-Wen Li, Bai-Sheng Zang, Xing-Wang Deng and Xi-Ping Wang


Development of the Casparian strip is delayed by blue light in pea stems

Ichirou Karahara, Eliko Takaya, Shigetaka Fujibayashi, Hiroshi Inoue and James L. Weller, et al.


Characterization of chromoplasts and carotenoids of red- and yellow-fleshed papaya (Carica papaya L.)

Ralf M. Schweiggert, Christof B. Steingass, Annerose Heller, Patricia Esquivel and Reinhold Carle


Shifts in xylem vessel diameter and embolisms in grafted apple trees of differing rootstock growth potential in response to drought

Taryn L. Bauerle, Michela Centinari and William L. Bauerle


Genome-wide gene expression profiles in response to plastid division perturbations

Jodi Maple, Per Winge, Astrid Elisabeth Tveitaskog, Daniela Gargano and Atle M. Bones, et al.


Host-dependent suppression of RNA silencing mediated by the viral suppressor p19 in potato

Joon-Woo Ahn, Jong Suk Lee, Seyed Javad Davarpanah, Jae-Heung Jeon and Youn-Il Park, et al.


Rapid Communication


Strigolactones promote nodulation in pea

Eloise Foo and Noel W. Davies


+++++++++++++++
Planta - 234 (6), 2011



Contents:


Original Articles


Rare sugar d-allose suppresses gibberellin signaling through hexokinase-dependent pathway in Oryza sativa L.

Takeshi Fukumoto, Akihito Kano, Kouhei Ohtani, Yumiko Yamasaki-Kokudo and Bong-Gyu Kim, et al.


Defence responses in Rpv3-dependent resistance to grapevine downy mildew

Karen Casagrande, Luigi Falginella, Simone Diego Castellarin, Raffaele Testolin and Gabriele Di Gaspero


Overexpression of the pepper antimicrobial protein CaAMP1 gene regulates the oxidative stress- and disease-related proteome in Arabidopsis

Sung Chul Lee, In Sun Hwang and Byung Kook Hwang


Isolation and characterization of the fragrant cyclamen O-methyltransferase involved in flower coloration

Yusuke Akita, Satoshi Kitamura, Yoshihiro Hase, Issay Narumi and Hiroshi Ishizaka, et al.


Biochemical characterization of laccase from hairy root culture of Brassica juncea L. and role of redox mediators to enhance its potential for the decolorization of textile dyes

Amar A. Telke, Anuradha N. Kagalkar, Umesh B. Jagtap, Neetin S. Desai and Vishwas A. Bapat, et al.


Rice CYP734A cytochrome P450s inactivate brassinosteroids in Arabidopsis

Leeann E. Thornton, Hao Peng and Michael M. Neff


Apical meristem exhaustion during determinate primary root growth in the moots koom 1 mutant of Arabidopsis thaliana

Alejandra Hernández-Barrera, Yamel Ugartechea-Chirino, Svetlana Shishkova, Selene Napsucialy-Mendivil and Aleš Soukup, et al.


Analysis of the expression of BohLOL1, which encodes an LSD1-like zinc finger protein in Bambusa oldhamii

Sheng-Hsiung Yeh, Choun-Sea Lin, Fu-Hui Wu and Ai-Yu Wang


Increased tolerance to salt stress in the phosphate-accumulating Arabidopsis mutants siz1 and pho2

Kenji Miura, Aiko Sato, Masaru Ohta and Jun Furukawa


Molecular cloning and biochemical characterization of three Concord grape (Vitis labrusca) flavonol 7-O-glucosyltransferases

Dawn Hall, Kyung Hee Kim and Vincenzo De Luca


Isolation and characterization of a novel peroxisomal choline monooxygenase in barley

Shiro Mitsuya, Junko Kuwahara, Keiko Ozaki, Eiji Saeki and Takashi Fujiwara, et al.


CaBLIND regulates axillary meristem initiation and transition to flowering in pepper

Dar Jeifetz, Rakefet David-Schwartz, Yelena Borovsky and Ilan Paran


Identification of regulators required for the reactivation of FLOWERING LOCUS C during Arabidopsis reproduction

Hyein Yun, Youbong Hyun, Min-Jeong Kang, Yoo-Sun Noh and Bosl Noh, et al.


Distinct fluctuations in nucleotide metabolism accompany the enhanced in vitro embryogenic capacity of Brassica cells over-expressing SHOOTMERISTEMLESS

Mohamed Elhiti, Hiroshi Ashihara and Claudio Stasolla


Passive water control at the surface of a superhydrophobic lichen

Christopher A. E. Hamlett, Neil James Shirtcliffe, F. Brian Pyatt, Michael I. Newton and Glen McHale, et al.


Characterization of As efflux from the roots of As hyperaccumulator Pteris vittata L.

Yi Huang, Masayoshi Hatayama and Chihiro Inoue


Repression of gibberellin biosynthesis or signaling produces striking alterations in poplar growth, morphology, and flowering

Christine Zawaski, Mahita Kadmiel, Jim Pickens, Cathleen Ma and Steven Strauss, et al.


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wtorek, 14 lutego 2012

Molecular Plant Pathology - 12 (4-9), 2011



Molecular Plant Pathology - 12 (4), 2011


Contents:

Pathogen profiles


Mycosphaerella fijiensis, the black leaf streak pathogen of banana: progress towards understanding pathogen biology and detection, disease development, and the challenges of control (pages 307–328)

ALICE C. L. CHURCHILL


Burkholderia glumae: next major pathogen of rice? (pages 329–339)

JONG HYUN HAM, REBECCA A. MELANSON and MILTON C. RUSH


Original articles


The beneficial effect of Trichoderma spp. on tomato is modulated by the plant genotype (pages 341–354)

MARINA TUCCI, MICHELINA RUOCCO, LUIGI DE MASI, MONICA DE PALMA and MATTEO LORITO


Expression of Arabidopsis pathogenesis-related genes during nematode infection (pages 355–364)

NOUREDDINE HAMAMOUCH, CHUNYING LI, PIL JOON SEO, CHUNG-MO PARK and ERIC L. DAVIS


Modification of recombinant maize ChitA chitinase by fungal chitinase-modifying proteins (pages 365–372)

TODD A. NAUMANN


An HrpB-dependent but type III-independent extracellular aspartic protease is a virulence factor of Ralstonia solanacearum (pages 373–380)

YEONHWA JEONG, HOON CHEONG, OKHEE CHOI, JUNG KYU KIM, YONGSUNG KANG, JINWOO KIM, SEUNGDON LEE, SERRY KOH, JAE SUN MOON and INGYU HWANG


The wxacO gene of Xanthomonas citri ssp. citri encodes a protein with a role in lipopolysaccharide biosynthesis, biofilm formation, stress tolerance and virulence (pages 381–396)

JINYUN LI and NIAN WANG


Organ identity and environmental conditions determine the effectiveness of nonhost resistance in the interaction between Arabidopsis thaliana and Magnaporthe oryzae (pages 397–402)

CHRISTINE SCHREIBER, ALAN J. SLUSARENKO and ULRICH SCHAFFRATH


Review


The coat protein leads the way: an update on basic and applied studies with the Brome mosaic virus coat protein (pages 403–412)

C. CHENG KAO, PENG NI, MASARAPU HEMA, XINLEI HUANG and BOGDAN DRAGNEA


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Molecular Plant Pathology - 12 (5), 2011




Contents:

Pathogen profile update


Mycosphaerella graminicola: from genomics to disease control (pages 413–424)

ELIZABETH S. ORTON, SIAN DELLER and JAMES K. M. BROWN


Original articles


Involvement of a putative response regulator FgRrg-1 in osmotic stress response, fungicide resistance and virulence in Fusarium graminearum (pages 425–436)

JINHUA JIANG, YINGZI YUN, JING FU, WON-BO SHIM and ZHONGHUA MA


Long-term protection against tobacco mosaic virus induced by the marine alga oligo-sulphated-galactan Poly-Ga in tobacco plants (pages 437–447)

JEANNETTE VERA, JORGE CASTRO, ALBERTO GONZÁLEZ, HERNA BARRIENTOS, BETTY MATSUHIRO, PATRICIO ARCE, GUSTAVO ZUNIGA and ALEJANDRA MOENNE


Inactivation of Snt2, a BAH/PHD-containing transcription factor, impairs pathogenicity and increases autophagosome abundance in Fusarium oxysporum (pages 449–461)

YOULIA DENISOV, STANLEY FREEMAN and ODED YARDEN


Identification of differentially expressed genes in a resistant versus a susceptible blueberry cultivar after infection by Colletotrichum acutatum (pages 463–477)

TIMOTHY D. MILES, BRAD DAY and ANNEMIEK C. SCHILDER


Regulators of G-protein signalling in Fusarium verticillioides mediate differential host–pathogen responses on nonviable versus viable maize kernels (pages 479–491)

MALA MUKHERJEE, JUNG-EUN KIM, YONG-SOON PARK, MICHAEL V. KOLOMIETS and WON-BO SHIM


Identification of serine/threonine kinase and nucleotide-binding site–leucine-rich repeat (NBS-LRR) genes in the fire blight resistance quantitative trait locus of apple cultivar ‘Evereste’ (pages 493–505)

GABRIELLA PARRAVICINI, CESARE GESSLER, CAROLINE DENANCÉ, PAULINE LASSERRE-ZUBER, EMILIE VERGNE, MARIE-NOËLLE BRISSET, ANDREA PATOCCHI, CHARLES-ERIC DUREL and GIOVANNI A. L. BROGGINI


Review


Fungal pathogenicity genes in the age of ‘omics’ (pages 507–514)

ANGELA P. VAN DE WOUW and BARBARA J. HOWLETT


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Molecular Plant Pathology - 12 (6), 2011




Contents:

Pathogen profile


Secrets of the subterranean pathosystem of Armillaria (pages 515–534)

KENDRA BAUMGARTNER, MARTIN P. A. COETZEE and DIRK HOFFMEISTER


Original articles


Narrowing down the apricot Plum pox virus resistance locus and comparative analysis with the peach genome syntenic region (pages 535–547)

ELSA MARÍA VERA RUIZ, JOSÉ MIGUEL SORIANO, CARLOS ROMERO, TETYANA ZHEBENTYAYEVA, JAVIER TEROL, ELENA ZURIAGA, GERARDO LLÁCER, ALBERT GLENN ABBOTT and MARÍA LUISA BADENES


The FRP1 F-box gene has different functions in sexuality, pathogenicity and metabolism in three fungal pathogens (pages 548–563)

WILFRIED JONKERS, JAN A. L. VAN KAN, PATRICK TIJM, YIN-WON LEE, PAUL TUDZYNSKI, MARTIJN REP and CAROLINE B. MICHIELSE


The Botrytis cinerea phytotoxin botcinic acid requires two polyketide synthases for production and has a redundant role in virulence with botrydial (pages 564–579)

BÉRENGERE DALMAIS, JULIA SCHUMACHER, JAVIER MORAGA, PASCAL LE PECHEUR, BETTINA TUDZYNSKI, ISIDRO GONZALEZ COLLADO and MURIEL VIAUD


Genome sequencing and comparative analysis of the carrot bacterial blight pathogen, Xanthomonas hortorum pv. carotae M081, for insights into pathogenicity and applications in molecular diagnostics (pages 580–594)

JEFFREY A. KIMBREL, SCOTT A. GIVAN, TODD N. TEMPLE, KENNETH B. JOHNSON and JEFF H. CHANG


Satellite RNA reduces expression of the 2b suppressor protein resulting in the attenuation of symptoms caused by Cucumber mosaic virus infection (pages 595–605)

WEI-NA HOU, CHENG-GUO DUAN, RONG-XIANG FANG, XIAO-YANG ZHOU and HUI-SHAN GUO


Flux of nitric oxide between the necrotrophic pathogen Botrytis cinerea and the host plant (pages 606–616)

JUAN L. TURRION-GOMEZ and ERNESTO P. BENITO


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Molecular Plant Pathology - 12 (7), 2011




Contents:

Pathogen profiles


Pseudomonas syringae pv. phaseolicola: from ‘has bean’ to supermodel (pages 617–627)

DAWN L. ARNOLD, HELEN C. LOVELL, ROBERT W. JACKSON and JOHN W. MANSFIELD


Pantoea stewartii subsp. stewartii: lessons learned from a xylem-dwelling pathogen of sweet corn (pages 628–637)

M. CAROLINE ROPER


Original articles


Invertases involved in the development of the parasitic plant Phelipanche ramosa: characterization of the dominant soluble acid isoform, PrSAI1 (pages 638–652)

RIDA DRAIE, THOMAS PÉRON, JEAN-BERNARD POUVREAU, CHRISTOPHE VÉRONÉSI, SANDRINE JÉGOU, PHILIPPE DELAVAULT, SÉVERINE THOIRON and PHILIPPE SIMIER


The SLT2 mitogen-activated protein kinase-mediated signalling pathway governs conidiation, morphogenesis, fungal virulence and production of toxin and melanin in the tangerine pathotype of Alternaria alternata (pages 653–665)

JONAR INGAN YAGO, CHING-HSUAN LIN and KUANG-REN CHUNG


Garlic virus X 11-kDa protein granules move within the cytoplasm and traffic a host protein normally found in the nucleolus (pages 666–676)

YUWEN LU, FEI YAN, WEI GUO, HONGYING ZHENG, LIN LIN, JIEJUN PENG, MICHAEL J. ADAMS and JIANPING CHEN


RNAi-mediated resistance to Cassava brown streak Uganda virus in transgenic cassava (pages 677–687)

JITENDER S. YADAV, EMMANUEL OGWOK, HENRY WAGABA, BASAVAPRABHU L. PATIL, BASAVARAJ BAGEWADI, TITUS ALICAI, ELIANA GAITAN-SOLIS, NIGEL J. TAYLOR and CLAUDE M. FAUQUET


Mapping studies of the Peach latent mosaic viroid reveal novel structural features (pages 688–701)

AUDREY DUBÉ, FRANÇOIS BOLDUC, MARTIN BISAILLON and JEAN-PIERRE PERREAULT


Physical association of pattern-triggered immunity (PTI) and effector-triggered immunity (ETI) immune receptors in Arabidopsis (pages 702–708)

YIPING QI, KENICHI TSUDA, JANE GLAZEBROOK and FUMIAKI KATAGIRI


Degeneration of hrpZ gene in Pseudomonas syringae pv. tabaci to evade tobacco defence: an arms race between tobacco and its bacterial pathogen (pages 709–714)

KAZUHIKO TSUNEMI, FUMIKO TAGUCHI, MIZURI MARUTANI, MEGUMI WATANABE-SUGIMOTO, YOSHISHIGE INAGAKI, KAZUHIRO TOYODA, TOMONORI SHIRAISHI and YUKI ICHINOSE


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Molecular Plant Pathology - 12 (8), 2011




Contents:

Original articles


Comparative analysis of the XopD type III secretion (T3S) effector family in plant pathogenic bacteria (pages 715–730)

JUNG-GUN KIM, KYLE W. TAYLOR and MARY BETH MUDGETT


Type III secretion-dependent host defence elicitation and type III secretion-independent growth within leaves by Xanthomonas campestris pv. campestris (pages 731–745)

WENXIAN SUN, LIJUAN LIU and ANDREW F. BENT


Negative regulation of defence signalling pathways by the EDR1 protein kinase (pages 746–758)

KATY M. CHRISTIANSEN, YANGNAN GU, NATALIE RODIBAUGH and ROGER W. INNES


Altered trichothecene biosynthesis in TRI6-silenced transformants of Fusarium culmorum influences the severity of crown and foot rot on durum wheat seedlings (pages 759–771)

BARBARA SCHERM, MARCELLA ORRU, VIRGILIO BALMAS, FRANCESCA SPANU, EMANUELA AZARA, GIOVANNA DELOGU, THOMAS M. HAMMOND, NANCY P. KELLER and QUIRICO MIGHELI


Evidence for involvement of Dicer-like, Argonaute and histone deacetylase proteins in gene silencing in Phytophthora infestans (pages 772–785)

RAMESH R. VETUKURI, ANNA O. AVROVA, LAURA J. GRENVILLE-BRIGGS, PIETER VAN WEST, FREDRIK SÖDERBOM, EUGENE I. SAVENKOV, STEPHEN C. WHISSON and CHRISTINA DIXELIUS


Expression of coordinately regulated defence response genes and analysis of their role in disease resistance in Medicago truncatula (pages 786–798)

DEBORAH A. SAMAC, SILVIA PENUELA, JUDY A. SCHNURR, E. NICOLE HUNT, DAWN FOSTER-HARTNETT, KATHRYN A. VANDENBOSCH and J. STEPHEN GANTT


Amino acid changes in P3, and not the overlapping pipo-encoded protein, determine virulence of Soybean mosaic virus on functionally immune Rsv1-genotype soybean (pages 799–807)

R-H. WEN, M. A. SAGHAI MAROOF and M. R. HAJIMORAD


p2 of Rice stripe virus (RSV) interacts with OsSGS3 and is a silencing suppressor (pages 808–814)

ZHENGUO DU, DONGLAI XIAO, JIANGUO WU, DONGSHENG JIA, ZHENGJIE YUAN, YING LIU, LIUYANG HU, ZHAO HAN, TAIYUN WEI, QIYING LIN, ZUJIAN WU and LIANHUI XIE


Review


Applications of flow cytometry in plant pathology for genome size determination, detection and physiological status (pages 815–828)

LIESBET D'HONDT, MONICA HÖFTE, ERIK VAN BOCKSTAELE and LEEN LEUS


Micro-Review


Application of high-throughput genome sequencing to intrapathovar variation in Pseudomonas syringae (pages 829–838)

DAVID J. STUDHOLME


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Molecular Plant Pathology - 12 (9), 2011




Contents:

Original articles


The biocontrol bacterium Pseudomonas fluorescens Pf29Arp strain affects the pathogenesis-related gene expression of the take-all fungus Gaeumannomyces graminis var. tritici on wheat roots (pages 839–854)

STÉPHANIE DAVAL, LIONEL LEBRETON, KÉVIN GAZENGEL, MORGANE BOUTIN, ANNE-YVONNE GUILLERM-ERCKELBOUDT and ALAIN SARNIGUET


Arabidopsis thaliana cdd1 mutant uncouples the constitutive activation of salicylic acid signalling from growth defects (pages 855–865)

SWADHIN SWAIN, SHWETA ROY, JYOTI SHAH, SASKIA VAN WEES, CORNÉ M. PIETERSE and ASHIS K. NANDI


Durable broad-spectrum powdery mildew resistance in pea er1 plants is conferred by natural loss-of-function mutations in PsMLO1 (pages 866–878)

MATT HUMPHRY, ANJA REINSTÄDLER, SERGEY IVANOV, TON BISSELING and RALPH PANSTRUGA


Transcriptomic profiling of citrus fruit peel tissues reveals fundamental effects of phenylpropanoids and ethylene on induced resistance (pages 879–897)

ANA-ROSA BALLESTER, M. TERESA LAFUENTE, JAVIER FORMENT, JOSÉ GADEA, RIC C. H. DE VOS, ARNAUD G. BOVY and LUIS GONZÁLEZ-CANDELAS


Ectopic expression of the p23 silencing suppressor of Citrus tristeza virus differentially modifies viral accumulation and tropism in two transgenic woody hosts (pages 898–910)

CARMEN FAGOAGA, GIOVANNI PENSABENE-BELLAVIA, PEDRO MORENO, LUÍS NAVARRO, RICARDO FLORES and LEANDRO PENA


Genetic background matters: a plant–virus gene-for-gene interaction is strongly influenced by genetic contexts (pages 911–920)

JOSSELIN MONTARRY, JULIETTE DOUMAYROU, VINCENT SIMON and BENOIT MOURY


Targets of selection in a disease resistance network in wild tomatoes (pages 921–927)

LAURA E. ROSE, LUKASZ GRZESKOWIAK (ŁUKASZ GRZEŚKOWIAK), ANJA C. HÖRGER, MARTIN GROTH and WOLFGANG STEPHAN


Reviews


The YopJ superfamily in plant-associated bacteria (pages 928–937)

JENNIFER D. LEWIS, AMY LEE, WENBO MA, HUANBIN ZHOU, DAVID S. GUTTMAN and DARRELL DESVEAUX


Top 10 plant viruses in molecular plant pathology (pages 938–954)

KAREN-BETH G. SCHOLTHOF, SCOTT ADKINS, HENRYK CZOSNEK, PETER PALUKAITIS, EMMANUEL JACQUOT, THOMAS HOHN, BARBARA HOHN, KEITH SAUNDERS, THIERRY CANDRESSE, PAUL AHLQUIST, CYNTHIA HEMENWAY and GARY D. FOSTER


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wtorek, 5 stycznia 2010

Genome Biology and Evolution

W roczniku 2009 Genome Biology and Evolution można poczytać o :
Adrian Schneider, Alexander Souvorov, Niv Sabath, Giddy Landan, Gaston H. Gonnet, Dan Graur - Estimates of Positive Darwinian Selection Are Inflated by Errors in Sequencing, Annotation, and Alignment

Andrej Benjak, Stéphanie Boué, Astrid Forneck, Josep M. Casacuberta - Recent amplification and impact of MITEs on the genome of grapevine (Vitis vinifera L.)

Andrew T. Beckenbach Jeffrey B. Joy - Evolution of the Mitochondrial Genomes of Gall Midges (Diptera: Cecidomyiidae): Rearrangement and Severe Truncation of tRNA Genes
Benjamin Dickins, Anton Nekrutenko - High-Resolution Mapping of Evolutionary Trajectories in a Phage

Catherine J. Pink, Siva K. Swaminathan, Ian Dunham, Jane Rogers, Andrew Ward, Laurence D. Hurst - Evidence That Replication-Associated Mutation Alone Does Not Explain Between-Chromosome Differences In Substitution Rates

Cédric Feschotte, Umeshkumar Keswani, Nirmal Ranganathan, Marcel L. Guibotsy, David Levine - Exploring Repetitive DNA Landscapes Using REPCLASS, a Tool That Automates the Classification of Transposable Elements in Eukaryotic Genomes

Cheong Xin Chan, Robert G. Beiko, Aaron E. Darling, Mark A. Ragan - Lateral Transfer of Genes and Gene Fragments in Prokaryotes

Chih-Horng Kuo, Howard Ochman - Deletional Bias across the Three Domains of Life

Chun-Hsi Chen, Trees-Juen Chuang, Ben-Yang Liao, Feng-Chi Chen - Scanning for the Signatures of Positive Selection for Human-Specific Insertions and Deletions

Claire Lemaitre, Marilia D. V. Braga, Christian Gautier, Marie-France Sagot, Eric Tannier, Gabriel A. B. Marais - Footprints of Inversions at Present and Past Pseudoautosomal Boundaries in Human Sex Chromosomes

Claudia C. Weber, Laurence D. Hurst - Protein Rates of Evolution Are Predicted by Double-Strand Break Events, Independent of Crossing-over Rates

Daniel A. Skelly, James Ronald, Caitlin F. Connelly, Joshua M. Akey - Population Genomics of Intron Splicing in 38 Saccharomyces cerevisiae Genome Sequences

Dong Dong, Guimei He, Shuyi Zhang, Zhaolei Zhang - Evolution of Olfactory Receptor Genes in Primates Dominated by Birth-and-Death Process
Editorial Board. Genome Biology and Evolution

Elie Desmond, Simonetta Gribaldo - Phylogenomics of Sterol Synthesis: Insights into the Origin, Evolution, and Diversity of a Key Eukaryotic Feature

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George E. Liu, Lu Jiang, Fei Tian, Bin Zhu, Jiuzhou Song - Calibration of Mutation Rates Reveals Diverse Subfamily Structure of Galliform CR1 Repeats

Hui Cai, Rebecca Thompson, Mateo F. Budinich, Jeff R. Broadbent, James L. Steele - Genome Sequence and Comparative Genome Analysis of Lactobacillus casei: Insights into Their Niche-Associated Evolution

Igor B. Rogozin, Malay Kumar Basu, Miklós Csürös, Eugene V. Koonin - Analysis of Rare Genomic Changes Does Not Support the Unikont–Bikont Phylogeny and Suggests Cyanobacterial Symbiosis as the Point of Primary Radiation of Eukaryotes

Ingo Braasch, Frédéric Brunet, Jean-Nicolas Volff, Manfred Schartl - Pigmentation Pathway Evolution after Whole-Genome Duplication in Fish

István Miklós, Aaron E. Darling - Efficient Sampling of Parsimonious Inversion Histories with Application to Genome Rearrangement in Yersinia

James J. Cai, Elhanan Borenstein, Rong Chen, Dmitri A. Petrov - Similarly Strong Purifying Selection Acts on Human Disease Genes of All Evolutionary Ages

Jan A. C. Vriezen, Michael Valliere, Margaret A. Riley - The Evolution of Reduced Microbial Killing

Jeffrey D. Jensen - On Reconciling Single and Recurrent Hitchhiking Models

Jochen B. W. Wolf, Axel Künstner, Kiwoong Nam, Mattias Jakobsson, Hans Ellegren - Nonlinear Dynamics of Nonsynonymous (dN) and Synonymous (dS) Substitution Rates Affects Inference of Selection

Kousuke Hanada, Takashi Kuromori, Fumiyoshi Myouga, Tetsuro Toyoda, Wen-Hsiung Li, Kazuo Shinozaki - Evolutionary Persistence of Functional Compensation by Duplicate Genes in Arabidopsis.

Liran Carmel, Eugene V. Koonin - A Universal Nonmonotonic Relationship between Gene Compactness and Expression Levels in Multicellular Eukaryotes

M. Ziemann, M. Bhave, S. Zachgo - Origin and Diversification of Land Plant CC-Type Glutaredoxins

Marc P. Hoeppner, Simon White, Daniel C. Jeffares, Anthony M. Poole - Evolutionarily Stable Association of Intronic snoRNAs and microRNAs with Their Host Genes
Michael S. Barker, Heiko Vogel, M. Eric Schranz - Paleopolyploidy in the Brassicales: Analyses of the Cleome Transcriptome Elucidate the History of Genome Duplications in Arabidopsis and Other Brassicales

Mihai Albu, Xiang Jia Min, G. Brian Golding, and Donal Hickey - Nucleotide Substitution Bias within the Genus Drosophila Affects the Pattern of Proteome Evolution
Mina Rho, Mo Zhou, Xiang Gao, Sun Kim, Haixu Tang, Michael Lynch - Independent Mammalian Genome Contractions Following the KT Boundary

Natalie Donaher, Goro Tanifuji, Naoko T. Onodera, Stephanie A. Malfatti, Patrick S. G. Chain, Yoshiaki Hara, John M. Archibald - The Complete Plastid Genome Sequence of the Secondarily Nonphotosynthetic Alga Cryptomonas paramecium: Reduction, Compaction, and Accelerated Evolutionary Rate

Olga Zhaxybayeva, W. Ford Doolittle, R. Thane Papke, J. Peter Gogarten - Intertwined Evolutionary Histories of Marine Synechococcus and Prochlorococcus marinus

Pascal-Antoine Christin, Emanuela Samaritani, Blaise Petitpierre, Nicolas Salamin, Guillaume Besnard - Evolutionary Insights on C4 Photosynthetic Subtypes in Grasses from Genomics and Phylogenetics

Paz Polak, Peter F. Arndt - Long-Range Bidirectional Strand Asymmetries Originate at CpG Islands in the Human Genome

Richard P. Meisel, Mira V. Han, Matthew W. Hahn - A Complex Suite of Forces Drives Gene Traffic from Drosophila X Chromosomes

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Takashi Gojobori, William Martin - Welcome to Genome Biology and Evolution
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Vanessa L. Bauer DuMont, Nadia D. Singh, Mark H. Wright, Charles F. Aquadro - Locus-Specific Decoupling of Base Composition Evolution at Synonymous Sites and Introns along the Drosophila melanogaster and Drosophila sechellia Lineages

W. A. Findlay, R. J. Redfield - Coevolution of DNA Uptake Sequences and Bacterial Proteomes

Wenfeng Qian Jianzhi Zhang - Protein Subcellular Relocalization in the Evolution of Yeast Singleton and Duplicate Genes

Wolfgang Otto, Peter F. Stadler, Francesc López-Giraldéz, Jeffrey P. Townsend, Vincent J. Lynch, and Günter P. Wagner - Measuring Transcription Factor–Binding Site Turnover: A Maximum Likelihood Approach Using Phylogenies

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sobota, 26 grudnia 2009

Grana

Grana
Wydawca: Taylor & Francis
Czasopismo wydawane cztery razy w roku w wersji elektronicznej i papierowej.

Spis treści ostatniego numeru (Volume 48 Issue 3 2009):

José Ángel Sánchez Agudo; Enrique Rico; José Sánchez Sánchez; Maria Montserrat Martínez-Ortega
Pollen morphology in the genus Veronica L. (Plantaginaceae) and its systematic significance

Julio V. Schneider; Daniela Klie; Johannes Kacza; Marilú L. Huertas
Infrageneric variability of pollen morphology in Palaua (Malveae, Malvaceae) and the taxonomic utility of quantitative pollen characters

David J. Batten
An unusual megaspore of uncertain systematic affinity from Lower Cretaceous deposits in south-east England and its biostratigraphic and palaeoenvironmental significance

Anneli Salonen; Tarja Ollikka; Elisabeth Grönlund; Lauri Ruottinen; Riitta Julkunen-Tiitto
Pollen analyses of honey from Finland

Maria Del Pilar de Sá-Otero; Sandra Armesto-Baztan; Emilia Díaz-Losada
Analysis of protein content in pollen loads produced in north-west Spain

Gretchen D. Jones; Shoil M. Greenberg
Pollen contamination of boll weevil traps

Dagfinn Moe; Anne E. Bjune
Attractive Spring-food for willow grouse (Lagopus lagopus subsp. lagopus L.) studied using plant macrofossils and pollen in faeces: a methodological discussion

Achilles Gerasimidis; Nikolaos Athanasiadis; Sampson Panajiotidis
8. Mount Voras (north-west Greece)

sobota, 19 grudnia 2009

Artykuł w języku angielskim:
T.C.F.R. Aragão, P.A.S. Souza, A.F. Uchôa, I.R. Costa, C. Bloch Jr.,F.A.P. Campos
Characterization of a methionine-rich protein from the seeds of Cereus jamacaru Mill. (Cactaceae) .
Brazilian Journal of Medical and Biological Research 2000, vol.33, n.8, s. 897-903.
Link do artykułu

Isolation and Characterisation of a Reserve Protein from the Seeds of Cereus jamacaru

Artykuł w języku angielskim:
Itayguara Ribeiro da Costa, Petrônio Augusto Simão de Souza, Carlos Bloch, Romulo Marino Llamoca-Zárate and Francisco A. P. Campos
Isolation and Characterisation of a Reserve Protein from the Seeds of Cereus jamacaru (Cactaceae)
Brazilian Archives of Biology and Technology, vol.44 no.4 Curitiba Dec. 2001

Link do artykułu